Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 SCT1YBL011W 2280 nt6.87□□□□□ -1.31
MSH4P40965 HST3YOR025W 1344 nt6.87□□□□□ -1.31
MSH4P40965 YDL119CYDL119C 924 nt6.87□□□□□ -1.31
MSH4P40965 YEL028WYEL028W 462 nt6.87□□□□□ -1.31
MSH4P40965 DCD1YHR144C 939 nt6.87□□□□□ -1.31
MSH4P40965 BCY1YIL033C 1251 nt6.87□□□□□ -1.31
MSH4P40965 YIL086CYIL086C 309 nt6.87□□□□□ -1.31
MSH4P40965 RPR2YIR015W 435 nt6.87□□□□□ -1.31
MSH4P40965 SUI2YJR007W 915 nt6.87□□□□□ -1.31
MSH4P40965 VPS68YOL129W 555 nt6.87□□□□□ -1.31
MSH4P40965 ATG12YBR217W 561 nt6.87□□□□□ -1.31
MSH4P40965 YKR015CYKR015C 1707 nt6.87□□□□□ -1.31
MSH4P40965 NFI1YOR156C 2181 nt6.86□□□□□ -1.31
MSH4P40965 HSP104YLL026W 2727 nt6.86□□□□□ -1.31
MSH4P40965 PRP46YPL151C 1356 nt6.86□□□□□ -1.31
MSH4P40965 YLH47YPR125W 1365 nt6.86□□□□□ -1.31
MSH4P40965 tR(ACG)DtR(ACG)D 73 nt6.86□□□□□ -1.31
MSH4P40965 tR(ACG)EtR(ACG)E 73 nt6.86□□□□□ -1.31
MSH4P40965 tR(ACG)KtR(ACG)K 73 nt6.86□□□□□ -1.31
MSH4P40965 tR(ACG)LtR(ACG)L 73 nt6.86□□□□□ -1.31
MSH4P40965 tR(ACG)OtR(ACG)O 73 nt6.86□□□□□ -1.31
MSH4P40965 DCG1YIR030C 735 nt6.86□□□□□ -1.31
MSH4P40965 YLR366WYLR366W 306 nt6.86□□□□□ -1.31
MSH4P40965 PUF3YLL013C 2640 nt6.86□□□□□ -1.31
MSH4P40965 ATG32YIL146C 1590 nt6.86□□□□□ -1.31
MSH4P40965 RAD24YER173W 1980 nt6.86□□□□□ -1.31
MSH4P40965 MRC1YCL061C 3291 nt6.86□□□□□ -1.31
MSH4P40965 IMA2YOL157C 1770 nt6.85□□□□□ -1.31
MSH4P40965 MIF2YKL089W 1650 nt6.85□□□□□ -1.31
MSH4P40965 RHB1YCR027C 630 nt6.85□□□□□ -1.31
MSH4P40965 SHR3YDL212W 633 nt6.85□□□□□ -1.31
MSH4P40965 YDR336WYDR336W 945 nt6.85□□□□□ -1.31
MSH4P40965 RPE1YJL121C 717 nt6.85□□□□□ -1.31
MSH4P40965 YLL017WYLL017W 312 nt6.85□□□□□ -1.31
MSH4P40965 OSW5YMR148W 447 nt6.85□□□□□ -1.31
MSH4P40965 RPC19YNL113W 429 nt6.85□□□□□ -1.31
MSH4P40965 RRP15YPR143W 753 nt6.85□□□□□ -1.31
MSH4P40965 PCS60YBR222C 1632 nt6.85□□□□□ -1.31
MSH4P40965 MCM6YGL201C 3054 nt6.85□□□□□ -1.31
MSH4P40965 OMS1YDR316W 1416 nt6.84□□□□□ -1.31
MSH4P40965 BRL1YHR036W 1416 nt6.84□□□□□ -1.31
MSH4P40965 CBP4YGR174C 513 nt6.84□□□□□ -1.31
MSH4P40965 GEP5YLR091W 882 nt6.84□□□□□ -1.31
MSH4P40965 SSP120YLR250W 705 nt6.84□□□□□ -1.31
MSH4P40965 SNO4YMR322C 714 nt6.84□□□□□ -1.31
MSH4P40965 HSP33YOR391C 714 nt6.84□□□□□ -1.31
MSH4P40965 HSP32YPL280W 714 nt6.84□□□□□ -1.31
MSH4P40965 CRZ1YNL027W 2037 nt6.84□□□□□ -1.31
MSH4P40965 ASN1YPR145W 1719 nt6.84□□□□□ -1.31
MSH4P40965 PTK2YJR059W 2457 nt6.83□□□□□ -1.32
MSH4P40965 COG7YGL005C 840 nt6.83□□□□□ -1.32
MSH4P40965 BLS1YLR408C 369 nt6.83□□□□□ -1.32
MSH4P40965 YIF1YNL263C 945 nt6.83□□□□□ -1.32
MSH4P40965 TFB6YOR352W 1032 nt6.83□□□□□ -1.32
MSH4P40965 AMA1YGR225W 1782 nt6.82□□□□□ -1.32
MSH4P40965 TEL2YGR099W 2067 nt6.82□□□□□ -1.32
MSH4P40965 CLB2YPR119W 1476 nt6.82□□□□□ -1.32
MSH4P40965 OCA4YCR095C 1089 nt6.82□□□□□ -1.32
MSH4P40965 YDL121CYDL121C 450 nt6.82□□□□□ -1.32
MSH4P40965 YHR095WYHR095W 495 nt6.82□□□□□ -1.32
MSH4P40965 YJR096WYJR096W 849 nt6.82□□□□□ -1.32
MSH4P40965 YLL047WYLL047W 384 nt6.82□□□□□ -1.32
MSH4P40965 YLR118CYLR118C 684 nt6.82□□□□□ -1.32
MSH4P40965 YMR135W-AYMR135W-A 534 nt6.82□□□□□ -1.32
MSH4P40965 CWC27YPL064C 906 nt6.82□□□□□ -1.32
MSH4P40965 POP4YBR257W 840 nt6.82□□□□□ -1.32
MSH4P40965 KKQ8YKL168C 2175 nt6.82□□□□□ -1.32
MSH4P40965 UTP9YHR196W 1728 nt6.81□□□□□ -1.32
MSH4P40965 UGO1YDR470C 1509 nt6.81□□□□□ -1.32
MSH4P40965 HST4YDR191W 1113 nt6.81□□□□□ -1.32
MSH4P40965 PIB1YDR313C 861 nt6.81□□□□□ -1.32
MSH4P40965 GEP7YGL057C 864 nt6.81□□□□□ -1.32
MSH4P40965 PHB1YGR132C 864 nt6.81□□□□□ -1.32
MSH4P40965 APN1YKL114C 1104 nt6.81□□□□□ -1.32
MSH4P40965 MRPL22YNL177C 930 nt6.81□□□□□ -1.32
MSH4P40965 TIF5YPR041W 1218 nt6.81□□□□□ -1.32
MSH4P40965 QRI1YDL103C 1434 nt6.81□□□□□ -1.32
MSH4P40965 ATG4YNL223W 1485 nt6.8□□□□□ -1.32
MSH4P40965 GRX6YDL010W 696 nt6.8□□□□□ -1.32
MSH4P40965 MDH3YDL078C 1032 nt6.8□□□□□ -1.32
MSH4P40965 MPM1YJL066C 759 nt6.8□□□□□ -1.32
MSH4P40965 ARG3YJL088W 1017 nt6.8□□□□□ -1.32
MSH4P40965 HYM1YKL189W 1200 nt6.8□□□□□ -1.32
MSH4P40965 YNR075C-AYNR075C-A 93 nt6.8□□□□□ -1.32
MSH4P40965 THI80YOR143C 960 nt6.8□□□□□ -1.32
MSH4P40965 YPL014WYPL014W 1146 nt6.8□□□□□ -1.32
MSH4P40965 PEX32YBR168W 1242 nt6.8□□□□□ -1.32
MSH4P40965 PUS9YDL036C 1389 nt6.8□□□□□ -1.32
MSH4P40965 RPT3YDR394W 1287 nt6.79□□□□□ -1.32
MSH4P40965 YDR541CYDR541C 1035 nt6.79□□□□□ -1.32
MSH4P40965 SUT1YGL162W 900 nt6.79□□□□□ -1.32
MSH4P40965 YLF2YHL014C 1218 nt6.79□□□□□ -1.32
MSH4P40965 YML090WYML090W 387 nt6.79□□□□□ -1.32
MSH4P40965 NCE103YNL036W 666 nt6.79□□□□□ -1.32
MSH4P40965 UBC11YOR339C 471 nt6.79□□□□□ -1.32
MSH4P40965 YPL068CYPL068C 882 nt6.79□□□□□ -1.32
MSH4P40965 GLN1YPR035W 1113 nt6.79□□□□□ -1.32
MSH4P40965 ALD6YPL061W 1503 nt6.79□□□□□ -1.32
MSH4P40965 MKK2YPL140C 1521 nt6.79□□□□□ -1.32
MSH4P40965 SLD2YKL108W 1362 nt6.79□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms