Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV13-1A0A0B4J241 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV13-1A0A0B4J241 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV13-1A0A0B4J241 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV13-1A0A0B4J241 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 AC004812.2-201ENST00000611079 2094 ntBASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 MIR3960-201ENST00000583311 91 ntBASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV13-1A0A0B4J241 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 ABCB10P4-201ENST00000566803 2184 ntBASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV13-1A0A0B4J241 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 AC016575.1-201ENST00000607026 382 ntBASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 AC012676.1-201ENST00000574705 1949 ntBASIC16.06■□□□□ 0.16
TRAV13-1A0A0B4J241 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 ABHD17AP4-201ENST00000411545 909 ntBASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 AL157400.5-201ENST00000507624 621 ntBASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV13-1A0A0B4J241 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 AC068473.5-201ENST00000616428 2072 ntBASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 AC025884.2-201ENST00000553429 711 ntBASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV13-1A0A0B4J241 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 SMPD5-203ENST00000639008 1464 ntBASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms