Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 FLC3YGL139W 2409 nt5.49□□□□□ -1.53
VTA1Q06263 SRV2YNL138W 1581 nt5.49□□□□□ -1.53
VTA1Q06263 VBA1YMR088C 1689 nt5.49□□□□□ -1.53
VTA1Q06263 RBA50YDR527W 1320 nt5.48□□□□□ -1.53
VTA1Q06263 UGO1YDR470C 1509 nt5.48□□□□□ -1.53
VTA1Q06263 STL1YDR536W 1710 nt5.48□□□□□ -1.53
VTA1Q06263 GIR2YDR152W 798 nt5.48□□□□□ -1.53
VTA1Q06263 RRT7YLL030C 342 nt5.48□□□□□ -1.53
VTA1Q06263 PHA2YNL316C 1005 nt5.48□□□□□ -1.53
VTA1Q06263 ALG5YPL227C 1005 nt5.48□□□□□ -1.53
VTA1Q06263 RBD2YPL246C 789 nt5.48□□□□□ -1.53
VTA1Q06263 SSK1YLR006C 2139 nt5.48□□□□□ -1.53
VTA1Q06263 TRK2YKR050W 2670 nt5.48□□□□□ -1.53
VTA1Q06263 OXP1YKL215C 3861 nt5.48□□□□□ -1.53
VTA1Q06263 SNT2YGL131C 4212 nt5.47□□□□□ -1.53
VTA1Q06263 RHB1YCR027C 630 nt5.47□□□□□ -1.53
VTA1Q06263 IPK1YDR315C 846 nt5.47□□□□□ -1.53
VTA1Q06263 YDR396WYDR396W 501 nt5.47□□□□□ -1.53
VTA1Q06263 TFS1YLR178C 660 nt5.47□□□□□ -1.53
VTA1Q06263 DIT1YDR403W 1611 nt5.46□□□□□ -1.54
VTA1Q06263 YJL193WYJL193W 1209 nt5.46□□□□□ -1.54
VTA1Q06263 PGU1YJR153W 1086 nt5.46□□□□□ -1.54
VTA1Q06263 PML1YLR016C 615 nt5.46□□□□□ -1.54
VTA1Q06263 DCN1YLR128W 810 nt5.46□□□□□ -1.54
VTA1Q06263 ENT2YLR206W 1842 nt5.46□□□□□ -1.54
VTA1Q06263 VTC2YFL004W 2487 nt5.46□□□□□ -1.54
VTA1Q06263 MAL11YGR289C 1851 nt5.45□□□□□ -1.54
VTA1Q06263 HSF1YGL073W 2502 nt5.45□□□□□ -1.54
VTA1Q06263 GYP1YOR070C 1914 nt5.45□□□□□ -1.54
VTA1Q06263 YCR097W-AYCR097W-A 267 nt5.45□□□□□ -1.54
VTA1Q06263 SIP2YGL208W 1248 nt5.45□□□□□ -1.54
VTA1Q06263 YIR043CYIR043C 693 nt5.45□□□□□ -1.54
VTA1Q06263 DAL82YNL314W 768 nt5.45□□□□□ -1.54
VTA1Q06263 RPS15YOL040C 429 nt5.45□□□□□ -1.54
VTA1Q06263 YPR150WYPR150W 522 nt5.45□□□□□ -1.54
VTA1Q06263 NSI1YDR026C 1713 nt5.45□□□□□ -1.54
VTA1Q06263 GPT2YKR067W 2232 nt5.44□□□□□ -1.54
VTA1Q06263 SSK22YCR073C 3996 nt5.44□□□□□ -1.54
VTA1Q06263 COX26YDR119W-A 201 nt5.44□□□□□ -1.54
VTA1Q06263 YGR176WYGR176W 348 nt5.44□□□□□ -1.54
VTA1Q06263 HSX1tR(CCU)J 72 nt5.44□□□□□ -1.54
VTA1Q06263 EFM4YIL064W 774 nt5.44□□□□□ -1.54
VTA1Q06263 MPM1YJL066C 759 nt5.44□□□□□ -1.54
VTA1Q06263 PGA3YML125C 939 nt5.44□□□□□ -1.54
VTA1Q06263 MTQ1YNL063W 945 nt5.44□□□□□ -1.54
VTA1Q06263 NUP1YOR098C 3231 nt5.44□□□□□ -1.54
VTA1Q06263 YAP1801YHR161C 1914 nt5.44□□□□□ -1.54
VTA1Q06263 HOS1YPR068C 1413 nt5.43□□□□□ -1.54
VTA1Q06263 AST1YBL069W 1290 nt5.43□□□□□ -1.54
VTA1Q06263 TIP41YPR040W 1071 nt5.43□□□□□ -1.54
VTA1Q06263 MET7YOR241W 1647 nt5.43□□□□□ -1.54
VTA1Q06263 GPI18YBR004C 1302 nt5.43□□□□□ -1.54
VTA1Q06263 TEF1YPR080W 1377 nt5.42□□□□□ -1.54
VTA1Q06263 TEF2YBR118W 1377 nt5.42□□□□□ -1.54
VTA1Q06263 YBR138CYBR138C 1575 nt5.42□□□□□ -1.54
VTA1Q06263 HST4YDR191W 1113 nt5.42□□□□□ -1.54
VTA1Q06263 YLL059CYLL059C 507 nt5.42□□□□□ -1.54
VTA1Q06263 MNN2YBR015C 1794 nt5.42□□□□□ -1.54
VTA1Q06263 RTT106YNL206C 1368 nt5.42□□□□□ -1.54
VTA1Q06263 GUP2YPL189W 1830 nt5.41□□□□□ -1.54
VTA1Q06263 APM1YPL259C 1428 nt5.41□□□□□ -1.54
VTA1Q06263 UTP7YER082C 1665 nt5.41□□□□□ -1.54
VTA1Q06263 GDB1YPR184W 4611 nt5.41□□□□□ -1.54
VTA1Q06263 UBA1YKL210W 3075 nt5.41□□□□□ -1.54
VTA1Q06263 SHE10YGL228W 1734 nt5.41□□□□□ -1.54
VTA1Q06263 ADY2YCR010C 852 nt5.41□□□□□ -1.54
VTA1Q06263 VCX1YDL128W 1236 nt5.41□□□□□ -1.54
VTA1Q06263 CAD1YDR423C 1230 nt5.41□□□□□ -1.54
VTA1Q06263 RPC19YNL113W 429 nt5.41□□□□□ -1.54
VTA1Q06263 ERI1YPL096C-A 207 nt5.41□□□□□ -1.54
VTA1Q06263 RGT1YKL038W 3513 nt5.41□□□□□ -1.54
VTA1Q06263 YCR006CYCR006C 474 nt5.4□□□□□ -1.54
VTA1Q06263 ASP1YDR321W 1146 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)CtN(GUU)C 74 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)FtN(GUU)F 74 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)GtN(GUU)G 74 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)KtN(GUU)K 74 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)LtN(GUU)L 74 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)N1tN(GUU)N1 74 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)N2tN(GUU)N2 74 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)O1tN(GUU)O1 74 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)O2tN(GUU)O2 74 nt5.4□□□□□ -1.54
VTA1Q06263 tN(GUU)PtN(GUU)P 74 nt5.4□□□□□ -1.54
VTA1Q06263 MRS3YJL133W 945 nt5.4□□□□□ -1.54
VTA1Q06263 RHO2YNL090W 579 nt5.4□□□□□ -1.54
VTA1Q06263 YOL079WYOL079W 399 nt5.4□□□□□ -1.54
VTA1Q06263 PRE2YPR103W 864 nt5.4□□□□□ -1.54
VTA1Q06263 RRT2YBR246W 1164 nt5.4□□□□□ -1.54
VTA1Q06263 RET1YOR207C 3450 nt5.4□□□□□ -1.55
VTA1Q06263 ASH1YKL185W 1767 nt5.39□□□□□ -1.55
VTA1Q06263 ARH1YDR376W 1482 nt5.39□□□□□ -1.55
VTA1Q06263 MMR1YLR190W 1476 nt5.39□□□□□ -1.55
VTA1Q06263 ECM3YOR092W 1842 nt5.39□□□□□ -1.55
VTA1Q06263 RAM1YDL090C 1296 nt5.39□□□□□ -1.55
VTA1Q06263 SYN8YAL014C 768 nt5.39□□□□□ -1.55
VTA1Q06263 YJR115WYJR115W 510 nt5.39□□□□□ -1.55
VTA1Q06263 SPC97YHR172W 2472 nt5.39□□□□□ -1.55
VTA1Q06263 LPL1YOR059C 1353 nt5.39□□□□□ -1.55
VTA1Q06263 NUD1YOR373W 2556 nt5.39□□□□□ -1.55
VTA1Q06263 BAP2YBR068C 1830 nt5.39□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms