Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 ISN1YOR155C 1353 nt5.93□□□□□ -1.46
BRF1P29056 VTH1YIL173W 4650 nt5.93□□□□□ -1.46
BRF1P29056 VTH2YJL222W 4650 nt5.93□□□□□ -1.46
BRF1P29056 UGX2YDL169C 672 nt5.93□□□□□ -1.46
BRF1P29056 LEU5YHR002W 1074 nt5.93□□□□□ -1.46
BRF1P29056 SEC13YLR208W 894 nt5.93□□□□□ -1.46
BRF1P29056 HAP3YBL021C 435 nt5.93□□□□□ -1.46
BRF1P29056 YMR119W-AYMR119W-A 375 nt5.93□□□□□ -1.46
BRF1P29056 AFT1YGL071W 2073 nt5.93□□□□□ -1.46
BRF1P29056 VTC2YFL004W 2487 nt5.93□□□□□ -1.46
BRF1P29056 RSC30YHR056C 2652 nt5.93□□□□□ -1.46
BRF1P29056 PRI2YKL045W 1587 nt5.93□□□□□ -1.46
BRF1P29056 MCX1YBR227C 1563 nt5.93□□□□□ -1.46
BRF1P29056 VRP1YLR337C 2454 nt5.92□□□□□ -1.46
BRF1P29056 MID1YNL291C 1647 nt5.92□□□□□ -1.46
BRF1P29056 DBF4YDR052C 2115 nt5.92□□□□□ -1.46
BRF1P29056 BCY1YIL033C 1251 nt5.92□□□□□ -1.46
BRF1P29056 DAP1YPL170W 459 nt5.92□□□□□ -1.46
BRF1P29056 ECM2YBR065C 1095 nt5.92□□□□□ -1.46
BRF1P29056 NHP6BYBR089C-A 300 nt5.92□□□□□ -1.46
BRF1P29056 MRPS5YBR251W 924 nt5.92□□□□□ -1.46
BRF1P29056 CYK3YDL117W 2658 nt5.92□□□□□ -1.46
BRF1P29056 HST3YOR025W 1344 nt5.92□□□□□ -1.46
BRF1P29056 GIP1YBR045C 1920 nt5.91□□□□□ -1.46
BRF1P29056 SPO7YAL009W 780 nt5.91□□□□□ -1.46
BRF1P29056 RPL10YLR075W 666 nt5.91□□□□□ -1.46
BRF1P29056 SCO2YBR024W 906 nt5.91□□□□□ -1.46
BRF1P29056 RAD24YER173W 1980 nt5.91□□□□□ -1.46
BRF1P29056 NTH2YBR001C 2343 nt5.91□□□□□ -1.46
BRF1P29056 EXO1YOR033C 2109 nt5.9□□□□□ -1.46
BRF1P29056 RPT3YDR394W 1287 nt5.9□□□□□ -1.46
BRF1P29056 YML012C-AYML012C-A 378 nt5.9□□□□□ -1.46
BRF1P29056 YHM2YMR241W 945 nt5.9□□□□□ -1.46
BRF1P29056 YEF1YEL041W 1488 nt5.9□□□□□ -1.47
BRF1P29056 YDL022C-AYDL022C-A 249 nt5.89□□□□□ -1.47
BRF1P29056 tR(ACG)DtR(ACG)D 73 nt5.89□□□□□ -1.47
BRF1P29056 tR(ACG)EtR(ACG)E 73 nt5.89□□□□□ -1.47
BRF1P29056 tR(ACG)KtR(ACG)K 73 nt5.89□□□□□ -1.47
BRF1P29056 tR(ACG)LtR(ACG)L 73 nt5.89□□□□□ -1.47
BRF1P29056 tR(ACG)OtR(ACG)O 73 nt5.89□□□□□ -1.47
BRF1P29056 RPE1YJL121C 717 nt5.89□□□□□ -1.47
BRF1P29056 RPN11YFR004W 921 nt5.88□□□□□ -1.47
BRF1P29056 SKI6YGR195W 741 nt5.88□□□□□ -1.47
BRF1P29056 POR1YNL055C 852 nt5.88□□□□□ -1.47
BRF1P29056 VMA4YOR332W 702 nt5.88□□□□□ -1.47
BRF1P29056 MEC3YLR288C 1425 nt5.88□□□□□ -1.47
BRF1P29056 OCA5YHL029C 2040 nt5.87□□□□□ -1.47
BRF1P29056 YTA12YMR089C 2478 nt5.87□□□□□ -1.47
BRF1P29056 ASP1YDR321W 1146 nt5.87□□□□□ -1.47
BRF1P29056 YNL019CYNL019C 855 nt5.87□□□□□ -1.47
BRF1P29056 YNL033WYNL033W 855 nt5.87□□□□□ -1.47
BRF1P29056 ATG12YBR217W 561 nt5.87□□□□□ -1.47
BRF1P29056 CLB1YGR108W 1416 nt5.87□□□□□ -1.47
BRF1P29056 BRL1YHR036W 1416 nt5.87□□□□□ -1.47
BRF1P29056 ATG4YNL223W 1485 nt5.87□□□□□ -1.47
BRF1P29056 KKQ8YKL168C 2175 nt5.86□□□□□ -1.47
BRF1P29056 TRP3YKL211C 1455 nt5.86□□□□□ -1.47
BRF1P29056 PHB1YGR132C 864 nt5.86□□□□□ -1.47
BRF1P29056 GON7YJL184W 372 nt5.86□□□□□ -1.47
BRF1P29056 ERI1YPL096C-A 207 nt5.86□□□□□ -1.47
BRF1P29056 SNF3YDL194W 2655 nt5.86□□□□□ -1.47
BRF1P29056 RSM10YDR041W 612 nt5.85□□□□□ -1.47
BRF1P29056 YHR095WYHR095W 495 nt5.85□□□□□ -1.47
BRF1P29056 DBP8YHR169W 1296 nt5.85□□□□□ -1.47
BRF1P29056 SUP2tY(GUA)D 75 nt5.85□□□□□ -1.47
BRF1P29056 SUP11tY(GUA)F1 75 nt5.85□□□□□ -1.47
BRF1P29056 SUP6tY(GUA)F2 75 nt5.85□□□□□ -1.47
BRF1P29056 SUP7tY(GUA)J1 75 nt5.85□□□□□ -1.47
BRF1P29056 SUP4tY(GUA)J2 75 nt5.85□□□□□ -1.47
BRF1P29056 SUP5tY(GUA)M1 75 nt5.85□□□□□ -1.47
BRF1P29056 SUP8tY(GUA)M2 75 nt5.85□□□□□ -1.47
BRF1P29056 SUP3tY(GUA)O 75 nt5.85□□□□□ -1.47
BRF1P29056 AAD15YOL165C 432 nt5.85□□□□□ -1.47
BRF1P29056 RPN7YPR108W 1290 nt5.85□□□□□ -1.47
BRF1P29056 ECM33YBR078W 1290 nt5.85□□□□□ -1.47
BRF1P29056 SIP5YMR140W 1470 nt5.84□□□□□ -1.47
BRF1P29056 UBC11YOR339C 471 nt5.84□□□□□ -1.47
BRF1P29056 ACC1YNR016C 6702 nt5.84□□□□□ -1.47
BRF1P29056 MRK1YDL079C 1506 nt5.84□□□□□ -1.48
BRF1P29056 CDC19YAL038W 1503 nt5.84□□□□□ -1.48
BRF1P29056 APM4YOL062C 1476 nt5.83□□□□□ -1.48
BRF1P29056 ELP2YGR200C 2367 nt5.83□□□□□ -1.48
BRF1P29056 MID2YLR332W 1131 nt5.83□□□□□ -1.48
BRF1P29056 WTM2YOR229W 1404 nt5.82□□□□□ -1.48
BRF1P29056 PMT2YAL023C 2280 nt5.82□□□□□ -1.48
BRF1P29056 PRT1YOR361C 2292 nt5.82□□□□□ -1.48
BRF1P29056 YME1YPR024W 2244 nt5.82□□□□□ -1.48
BRF1P29056 GCR2YNL199C 1605 nt5.82□□□□□ -1.48
BRF1P29056 YJR124CYJR124C 1347 nt5.82□□□□□ -1.48
BRF1P29056 CBP4YGR174C 513 nt5.82□□□□□ -1.48
BRF1P29056 YNR040WYNR040W 771 nt5.82□□□□□ -1.48
BRF1P29056 MDY2YOL111C 639 nt5.82□□□□□ -1.48
BRF1P29056 ADE13YLR359W 1449 nt5.82□□□□□ -1.48
BRF1P29056 APL6YGR261C 2430 nt5.82□□□□□ -1.48
BRF1P29056 SOG2YOR353C 2376 nt5.81□□□□□ -1.48
BRF1P29056 YPK2YMR104C 2034 nt5.81□□□□□ -1.48
BRF1P29056 PEX7YDR142C 1128 nt5.81□□□□□ -1.48
BRF1P29056 YHR193C-AYHR193C-A 375 nt5.81□□□□□ -1.48
BRF1P29056 SNO4YMR322C 714 nt5.81□□□□□ -1.48
BRF1P29056 HSP33YOR391C 714 nt5.81□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 43.2 ms