Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 PUN1YLR414C 792 nt13.45□□□□□ -0.26
VPS13Q07878 PTC2YER089C 1395 nt13.39□□□□□ -0.27
VPS13Q07878 MXR2YCL033C 507 nt13.35□□□□□ -0.27
VPS13Q07878 YBL100CYBL100C 315 nt13.34□□□□□ -0.27
VPS13Q07878 YJL152WYJL152W 360 nt13.3□□□□□ -0.28
VPS13Q07878 PAU16YKL224C 372 nt13.3□□□□□ -0.28
VPS13Q07878 YHR049C-AYHR049C-A 297 nt13.28□□□□□ -0.28
VPS13Q07878 YDR433WYDR433W 441 nt13.26□□□□□ -0.29
VPS13Q07878 POA1YBR022W 534 nt13.22□□□□□ -0.29
VPS13Q07878 TRM9YML014W 840 nt13.2□□□□□ -0.3
VPS13Q07878 CCT6YDR188W 1641 nt13.19□□□□□ -0.3
VPS13Q07878 FIS1YIL065C 468 nt13.18□□□□□ -0.3
VPS13Q07878 YKR040CYKR040C 504 nt13.14□□□□□ -0.31
VPS13Q07878 NAB2YGL122C 1578 nt13.13□□□□□ -0.31
VPS13Q07878 PRE6YOL038W 765 nt13.12□□□□□ -0.31
VPS13Q07878 IDH1YNL037C 1083 nt13.11□□□□□ -0.31
VPS13Q07878 YPS1YLR120C 1710 nt13.11□□□□□ -0.31
VPS13Q07878 FPR4YLR449W 1179 nt13.08□□□□□ -0.32
VPS13Q07878 FUN26YAL022C 1554 nt13.05□□□□□ -0.32
VPS13Q07878 BUD23YCR047C 828 nt13.04□□□□□ -0.32
VPS13Q07878 YFR018CYFR018C 1092 nt12.98□□□□□ -0.33
VPS13Q07878 DED1YOR204W 1815 nt12.97□□□□□ -0.33
VPS13Q07878 PHO4YFR034C 939 nt12.97□□□□□ -0.33
VPS13Q07878 DAL1YIR027C 1383 nt12.94□□□□□ -0.34
VPS13Q07878 INM2YDR287W 879 nt12.92□□□□□ -0.34
VPS13Q07878 YLR235CYLR235C 399 nt12.92□□□□□ -0.34
VPS13Q07878 PTH1YHR189W 573 nt12.91□□□□□ -0.34
VPS13Q07878 GBP2YCL011C 1284 nt12.89□□□□□ -0.35
VPS13Q07878 FRD1YEL047C 1413 nt12.81□□□□□ -0.36
VPS13Q07878 SNF6YHL025W 999 nt12.79□□□□□ -0.36
VPS13Q07878 TIR4YOR009W 1464 nt12.79□□□□□ -0.36
VPS13Q07878 RRT5YFR032C 870 nt12.79□□□□□ -0.36
VPS13Q07878 LCB1YMR296C 1677 nt12.75□□□□□ -0.37
VPS13Q07878 SUF2tP(AGG)C 72 nt12.72□□□□□ -0.37
VPS13Q07878 SUF10tP(AGG)N 72 nt12.72□□□□□ -0.37
VPS13Q07878 YKL030WYKL030W 606 nt12.71□□□□□ -0.37
VPS13Q07878 TCD2YKL027W 1344 nt12.68□□□□□ -0.38
VPS13Q07878 YFL066CYFL066C 1179 nt12.65□□□□□ -0.38
VPS13Q07878 CAC2YML102W 1407 nt12.61□□□□□ -0.39
VPS13Q07878 tL(GAG)GtL(GAG)G 82 nt12.6□□□□□ -0.39
VPS13Q07878 DIC1YLR348C 897 nt12.59□□□□□ -0.39
VPS13Q07878 RAD51YER095W 1203 nt12.58□□□□□ -0.4
VPS13Q07878 ART5YGR068C 1761 nt12.55□□□□□ -0.4
VPS13Q07878 YMR244WYMR244W 1068 nt12.54□□□□□ -0.4
VPS13Q07878 YMR057CYMR057C 372 nt12.54□□□□□ -0.4
VPS13Q07878 RRD1YIL153W 1182 nt12.52□□□□□ -0.41
VPS13Q07878 ALF1YNL148C 765 nt12.5□□□□□ -0.41
VPS13Q07878 RPM1RPM1 483 nt12.49□□□□□ -0.41
VPS13Q07878 YCL048W-AYCL048W-A 240 nt12.49□□□□□ -0.41
VPS13Q07878 GLR1YPL091W 1452 nt12.44□□□□□ -0.42
VPS13Q07878 NAT4YMR069W 858 nt12.41□□□□□ -0.42
VPS13Q07878 YCL042WYCL042W 360 nt12.4□□□□□ -0.42
VPS13Q07878 TIM23YNR017W 669 nt12.4□□□□□ -0.43
VPS13Q07878 FMT1YBL013W 1206 nt12.39□□□□□ -0.43
VPS13Q07878 FPS1YLL043W 2010 nt12.35□□□□□ -0.43
VPS13Q07878 YLR179CYLR179C 606 nt12.34□□□□□ -0.43
VPS13Q07878 YDR095CYDR095C 411 nt12.31□□□□□ -0.44
VPS13Q07878 SOR2YDL246C 1074 nt12.31□□□□□ -0.44
VPS13Q07878 SOR1YJR159W 1074 nt12.31□□□□□ -0.44
VPS13Q07878 YPR064WYPR064W 420 nt12.29□□□□□ -0.44
VPS13Q07878 MSF1YPR047W 1410 nt12.29□□□□□ -0.44
VPS13Q07878 GLK1YCL040W 1503 nt12.27□□□□□ -0.45
VPS13Q07878 GFD2YCL036W 1701 nt12.25□□□□□ -0.45
VPS13Q07878 RBG2YGR173W 1107 nt12.24□□□□□ -0.45
VPS13Q07878 RPP2AYOL039W 321 nt12.19□□□□□ -0.46
VPS13Q07878 MIR1YJR077C 936 nt12.19□□□□□ -0.46
VPS13Q07878 YNL115CYNL115C 1935 nt12.18□□□□□ -0.46
VPS13Q07878 WSC2YNL283C 1512 nt12.16□□□□□ -0.46
VPS13Q07878 PEX25YPL112C 1185 nt12.16□□□□□ -0.46
VPS13Q07878 SPT5YML010W 3192 nt12.14□□□□□ -0.47
VPS13Q07878 RTS2YOR077W 699 nt12.11□□□□□ -0.47
VPS13Q07878 YHR165W-AYHR165W-A 312 nt12.09□□□□□ -0.47
VPS13Q07878 CWP1YKL096W 720 nt12.08□□□□□ -0.48
VPS13Q07878 PET9YBL030C 957 nt12.07□□□□□ -0.48
VPS13Q07878 PTP1YDL230W 1008 nt12.04□□□□□ -0.48
VPS13Q07878 YLR349WYLR349W 507 nt12.03□□□□□ -0.48
VPS13Q07878 SAM1YLR180W 1149 nt12□□□□□ -0.49
VPS13Q07878 NDI1YML120C 1542 nt12□□□□□ -0.49
VPS13Q07878 THI74YDR438W 1113 nt11.99□□□□□ -0.49
VPS13Q07878 TAD3YLR316C 969 nt11.96□□□□□ -0.5
VPS13Q07878 RBG1YAL036C 1110 nt11.95□□□□□ -0.5
VPS13Q07878 FMP52YER004W 696 nt11.95□□□□□ -0.5
VPS13Q07878 AHT1YHR093W 549 nt11.94□□□□□ -0.5
VPS13Q07878 YNR029CYNR029C 1290 nt11.94□□□□□ -0.5
VPS13Q07878 YGL034CYGL034C 366 nt11.94□□□□□ -0.5
VPS13Q07878 ADH2YMR303C 1047 nt11.91□□□□□ -0.5
VPS13Q07878 BDH1YAL060W 1149 nt11.9□□□□□ -0.5
VPS13Q07878 DCW1YKL046C 1350 nt11.85□□□□□ -0.51
VPS13Q07878 ADH7YCR105W 1086 nt11.83□□□□□ -0.52
VPS13Q07878 DAT1YML113W 747 nt11.82□□□□□ -0.52
VPS13Q07878 MEP2YNL142W 1500 nt11.8□□□□□ -0.52
VPS13Q07878 YSP3YOR003W 1437 nt11.78□□□□□ -0.52
VPS13Q07878 VPS75YNL246W 795 nt11.78□□□□□ -0.52
VPS13Q07878 PCM1YEL058W 1674 nt11.75□□□□□ -0.53
VPS13Q07878 YIH1YCR059C 777 nt11.75□□□□□ -0.53
VPS13Q07878 ALG3YBL082C 1377 nt11.74□□□□□ -0.53
VPS13Q07878 YSC84YHR016C 1407 nt11.73□□□□□ -0.53
VPS13Q07878 STE4YOR212W 1272 nt11.73□□□□□ -0.53
VPS13Q07878 UBA4YHR111W 1323 nt11.72□□□□□ -0.53
VPS13Q07878 XYL2YLR070C 1071 nt11.72□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 72.1 ms