Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 YMR057CYMR057C 372 nt11.03□□□□□ -0.64
TY1A-LR1P0CX68 YNL208WYNL208W 600 nt11.02□□□□□ -0.65
TY1A-LR1P0CX68 FIS1YIL065C 468 nt10.99□□□□□ -0.65
TY1A-LR1P0CX68 YOR169CYOR169C 465 nt10.99□□□□□ -0.65
TY1A-LR1P0CX68 YGL188CYGL188C 174 nt10.97□□□□□ -0.65
TY1A-LR1P0CX68 YJR018WYJR018W 363 nt10.97□□□□□ -0.65
TY1A-LR1P0CX68 URE2YNL229C 1065 nt10.97□□□□□ -0.65
TY1A-LR1P0CX68 PET122YER153C 765 nt10.96□□□□□ -0.65
TY1A-LR1P0CX68 AIR1YIL079C 1083 nt10.96□□□□□ -0.65
TY1A-LR1P0CX68 ATP6Q0085 780 nt10.93□□□□□ -0.66
TY1A-LR1P0CX68 YJL107CYJL107C 1164 nt10.91□□□□□ -0.66
TY1A-LR1P0CX68 YPS1YLR120C 1710 nt10.9□□□□□ -0.66
TY1A-LR1P0CX68 EMI2YDR516C 1503 nt10.89□□□□□ -0.67
TY1A-LR1P0CX68 RSM23YGL129C 1353 nt10.86□□□□□ -0.67
TY1A-LR1P0CX68 DAL1YIR027C 1383 nt10.86□□□□□ -0.67
TY1A-LR1P0CX68 YJR120WYJR120W 351 nt10.81□□□□□ -0.68
TY1A-LR1P0CX68 YDJ1YNL064C 1230 nt10.81□□□□□ -0.68
TY1A-LR1P0CX68 GUT2YIL155C 1950 nt10.81□□□□□ -0.68
TY1A-LR1P0CX68 PCH2YBR186W 1695 nt10.8□□□□□ -0.68
TY1A-LR1P0CX68 THP3YPR045C 1413 nt10.79□□□□□ -0.68
TY1A-LR1P0CX68 PHO4YFR034C 939 nt10.79□□□□□ -0.68
TY1A-LR1P0CX68 KTR3YBR205W 1215 nt10.79□□□□□ -0.68
TY1A-LR1P0CX68 SDH1YKL148C 1923 nt10.79□□□□□ -0.68
TY1A-LR1P0CX68 FPR4YLR449W 1179 nt10.78□□□□□ -0.68
TY1A-LR1P0CX68 YAL016C-BYAL016C-B 186 nt10.77□□□□□ -0.69
TY1A-LR1P0CX68 PIB2YGL023C 1908 nt10.76□□□□□ -0.69
TY1A-LR1P0CX68 FTR1YER145C 1215 nt10.75□□□□□ -0.69
TY1A-LR1P0CX68 YEL074WYEL074W 339 nt10.74□□□□□ -0.69
TY1A-LR1P0CX68 YHR165W-AYHR165W-A 312 nt10.74□□□□□ -0.69
TY1A-LR1P0CX68 YJR154WYJR154W 1041 nt10.74□□□□□ -0.69
TY1A-LR1P0CX68 YDL221WYDL221W 552 nt10.73□□□□□ -0.69
TY1A-LR1P0CX68 LSM12YHR121W 564 nt10.72□□□□□ -0.69
TY1A-LR1P0CX68 YMR090WYMR090W 684 nt10.72□□□□□ -0.69
TY1A-LR1P0CX68 NEM1YHR004C 1341 nt10.72□□□□□ -0.69
TY1A-LR1P0CX68 CAC2YML102W 1407 nt10.72□□□□□ -0.69
TY1A-LR1P0CX68 GAR1YHR089C 618 nt10.71□□□□□ -0.69
TY1A-LR1P0CX68 YDR095CYDR095C 411 nt10.69□□□□□ -0.7
TY1A-LR1P0CX68 STB1YNL309W 1263 nt10.68□□□□□ -0.7
TY1A-LR1P0CX68 FPS1YLL043W 2010 nt10.67□□□□□ -0.7
TY1A-LR1P0CX68 COG1YGL223C 1254 nt10.67□□□□□ -0.7
TY1A-LR1P0CX68 YPL041CYPL041C 624 nt10.67□□□□□ -0.7
TY1A-LR1P0CX68 FTH1YBR207W 1398 nt10.66□□□□□ -0.7
TY1A-LR1P0CX68 STD1YOR047C 1335 nt10.65□□□□□ -0.7
TY1A-LR1P0CX68 PTP1YDL230W 1008 nt10.65□□□□□ -0.7
TY1A-LR1P0CX68 PAB1YER165W 1734 nt10.64□□□□□ -0.71
TY1A-LR1P0CX68 INM2YDR287W 879 nt10.64□□□□□ -0.71
TY1A-LR1P0CX68 SEC11YIR022W 504 nt10.61□□□□□ -0.71
TY1A-LR1P0CX68 YGL118CYGL118C 438 nt10.6□□□□□ -0.71
TY1A-LR1P0CX68 PEX27YOR193W 1131 nt10.6□□□□□ -0.71
TY1A-LR1P0CX68 MOD5YOR274W 1287 nt10.6□□□□□ -0.71
TY1A-LR1P0CX68 SCC4YER147C 1875 nt10.58□□□□□ -0.72
TY1A-LR1P0CX68 AST1YBL069W 1290 nt10.58□□□□□ -0.72
TY1A-LR1P0CX68 YLR036CYLR036C 612 nt10.57□□□□□ -0.72
TY1A-LR1P0CX68 YHP1YDR451C 1062 nt10.56□□□□□ -0.72
TY1A-LR1P0CX68 RRN5YLR141W 1092 nt10.56□□□□□ -0.72
TY1A-LR1P0CX68 MPC1YGL080W 393 nt10.55□□□□□ -0.72
TY1A-LR1P0CX68 YMR306C-AYMR306C-A 390 nt10.54□□□□□ -0.72
TY1A-LR1P0CX68 IRC15YPL017C 1500 nt10.53□□□□□ -0.72
TY1A-LR1P0CX68 PIC2YER053C 903 nt10.53□□□□□ -0.72
TY1A-LR1P0CX68 YHL044WYHL044W 708 nt10.53□□□□□ -0.72
TY1A-LR1P0CX68 YBL081WYBL081W 1107 nt10.53□□□□□ -0.72
TY1A-LR1P0CX68 MPS2YGL075C 1164 nt10.52□□□□□ -0.73
TY1A-LR1P0CX68 SSA1YAL005C 1929 nt10.52□□□□□ -0.73
TY1A-LR1P0CX68 UME6YDR207C 2511 nt10.51□□□□□ -0.73
TY1A-LR1P0CX68 YML079WYML079W 606 nt10.51□□□□□ -0.73
TY1A-LR1P0CX68 BNS1YGR230W 414 nt10.5□□□□□ -0.73
TY1A-LR1P0CX68 PHO92YDR374C 921 nt10.48□□□□□ -0.73
TY1A-LR1P0CX68 UBC12YLR306W 567 nt10.48□□□□□ -0.73
TY1A-LR1P0CX68 GIS3YLR094C 1509 nt10.47□□□□□ -0.73
TY1A-LR1P0CX68 YHL050CYHL050C 2094 nt10.46□□□□□ -0.73
TY1A-LR1P0CX68 SCR1SCR1 522 nt10.46□□□□□ -0.73
TY1A-LR1P0CX68 YSC84YHR016C 1407 nt10.46□□□□□ -0.74
TY1A-LR1P0CX68 RPP2AYOL039W 321 nt10.45□□□□□ -0.74
TY1A-LR1P0CX68 RTF1YGL244W 1677 nt10.44□□□□□ -0.74
TY1A-LR1P0CX68 tR(UCU)Q1tR(UCU)Q1 73 nt10.43□□□□□ -0.74
TY1A-LR1P0CX68 YNL234WYNL234W 1281 nt10.43□□□□□ -0.74
TY1A-LR1P0CX68 HOS2YGL194C 1359 nt10.42□□□□□ -0.74
TY1A-LR1P0CX68 YBL100CYBL100C 315 nt10.42□□□□□ -0.74
TY1A-LR1P0CX68 PTK1YKL198C 1989 nt10.41□□□□□ -0.74
TY1A-LR1P0CX68 RPP2BYDR382W 333 nt10.41□□□□□ -0.74
TY1A-LR1P0CX68 ARC19YKL013C 516 nt10.41□□□□□ -0.74
TY1A-LR1P0CX68 NAT5YOR253W 531 nt10.41□□□□□ -0.74
TY1A-LR1P0CX68 YTH1YPR107C 627 nt10.41□□□□□ -0.74
TY1A-LR1P0CX68 BNA3YJL060W 1335 nt10.4□□□□□ -0.74
TY1A-LR1P0CX68 COX3Q0275 810 nt10.4□□□□□ -0.74
TY1A-LR1P0CX68 REC114YMR133W 1287 nt10.4□□□□□ -0.74
TY1A-LR1P0CX68 ICE2YIL090W 1476 nt10.38□□□□□ -0.75
TY1A-LR1P0CX68 TIR1YER011W 765 nt10.38□□□□□ -0.75
TY1A-LR1P0CX68 GTT3YEL017W 1014 nt10.37□□□□□ -0.75
TY1A-LR1P0CX68 AIM41YOR215C 558 nt10.37□□□□□ -0.75
TY1A-LR1P0CX68 APM1YPL259C 1428 nt10.37□□□□□ -0.75
TY1A-LR1P0CX68 SED5YLR026C 1023 nt10.36□□□□□ -0.75
TY1A-LR1P0CX68 YER088W-BYER088W-B 147 nt10.35□□□□□ -0.75
TY1A-LR1P0CX68 MRPL36YBR122C 534 nt10.35□□□□□ -0.75
TY1A-LR1P0CX68 FAR3YMR052W 615 nt10.33□□□□□ -0.76
TY1A-LR1P0CX68 SRB2YHR041C 633 nt10.32□□□□□ -0.76
TY1A-LR1P0CX68 FUN26YAL022C 1554 nt10.31□□□□□ -0.76
TY1A-LR1P0CX68 RRT12YCR045C 1476 nt10.31□□□□□ -0.76
TY1A-LR1P0CX68 ARP6YLR085C 1317 nt10.28□□□□□ -0.76
TY1A-LR1P0CX68 YMR147WYMR147W 672 nt10.27□□□□□ -0.77
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms