Protein–RNA interactions for Protein: P41912

SHR5, Ras modification protein ERF4, yeastyeast

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHR5P41912 YFT2YDR319C 825 nt5.94□□□□□ -1.46
SHR5P41912 YPR1YDR368W 939 nt5.94□□□□□ -1.46
SHR5P41912 YER134CYER134C 537 nt5.94□□□□□ -1.46
SHR5P41912 RGD2YFL047W 2145 nt5.94□□□□□ -1.46
SHR5P41912 YMR252CYMR252C 405 nt5.94□□□□□ -1.46
SHR5P41912 LTO1YNL260C 597 nt5.94□□□□□ -1.46
SHR5P41912 YLH47YPR125W 1365 nt5.93□□□□□ -1.46
SHR5P41912 MAL13YGR288W 1422 nt5.93□□□□□ -1.46
SHR5P41912 IRS4YKR019C 1848 nt5.93□□□□□ -1.46
SHR5P41912 FAL1YDR021W 1200 nt5.93□□□□□ -1.46
SHR5P41912 IRC6YFR043C 714 nt5.93□□□□□ -1.46
SHR5P41912 PPE1YHR075C 1203 nt5.93□□□□□ -1.46
SHR5P41912 YIL047C-AYIL047C-A 369 nt5.93□□□□□ -1.46
SHR5P41912 GCN3YKR026C 918 nt5.93□□□□□ -1.46
SHR5P41912 RUF23RUF23 254 nt5.93□□□□□ -1.46
SHR5P41912 YOL107WYOL107W 1029 nt5.93□□□□□ -1.46
SHR5P41912 CTF19YPL018W 1110 nt5.93□□□□□ -1.46
SHR5P41912 SRP101YDR292C 1866 nt5.93□□□□□ -1.46
SHR5P41912 SLA2YNL243W 2907 nt5.93□□□□□ -1.46
SHR5P41912 CCT3YJL014W 1605 nt5.92□□□□□ -1.46
SHR5P41912 RIX7YLL034C 2514 nt5.92□□□□□ -1.46
SHR5P41912 YHL012WYHL012W 1482 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)BtG(GCC)B 71 nt5.92□□□□□ -1.46
SHR5P41912 SUF16tG(GCC)C 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)D1tG(GCC)D1 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)D2tG(GCC)D2 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)EtG(GCC)E 71 nt5.92□□□□□ -1.46
SHR5P41912 SUF20tG(GCC)F1 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)F2tG(GCC)F2 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)G1tG(GCC)G1 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)G2tG(GCC)G2 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)J1tG(GCC)J1 71 nt5.92□□□□□ -1.46
SHR5P41912 VMA3YEL027W 483 nt5.92□□□□□ -1.46
SHR5P41912 SUF23tG(GCC)J2 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)MtG(GCC)M 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)O1tG(GCC)O1 71 nt5.92□□□□□ -1.46
SHR5P41912 SUF17tG(GCC)O2 71 nt5.92□□□□□ -1.46
SHR5P41912 HHY1YEL059W 309 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)P1tG(GCC)P1 71 nt5.92□□□□□ -1.46
SHR5P41912 tG(GCC)P2tG(GCC)P2 71 nt5.92□□□□□ -1.46
SHR5P41912 UBC6YER100W 753 nt5.92□□□□□ -1.46
SHR5P41912 CAF16YFL028C 870 nt5.92□□□□□ -1.46
SHR5P41912 ECM14YHR132C 1293 nt5.92□□□□□ -1.46
SHR5P41912 LYS1YIR034C 1122 nt5.92□□□□□ -1.46
SHR5P41912 YKR045CYKR045C 552 nt5.92□□□□□ -1.46
SHR5P41912 HCR1YLR192C 798 nt5.92□□□□□ -1.46
SHR5P41912 YMR122CYMR122C 375 nt5.92□□□□□ -1.46
SHR5P41912 SCS7YMR272C 1155 nt5.92□□□□□ -1.46
SHR5P41912 YPL257WYPL257W 582 nt5.92□□□□□ -1.46
SHR5P41912 TAZ1YPR140W 1146 nt5.92□□□□□ -1.46
SHR5P41912 RRT2YBR246W 1164 nt5.92□□□□□ -1.46
SHR5P41912 UIP5YKR044W 1332 nt5.92□□□□□ -1.46
SHR5P41912 STT3YGL022W 2157 nt5.91□□□□□ -1.46
SHR5P41912 CCT8YJL008C 1707 nt5.91□□□□□ -1.46
SHR5P41912 HVG1YER039C 750 nt5.91□□□□□ -1.46
SHR5P41912 IPI1YHR085W 1005 nt5.91□□□□□ -1.46
SHR5P41912 YJR146WYJR146W 354 nt5.91□□□□□ -1.46
SHR5P41912 MIA40YKL195W 1212 nt5.91□□□□□ -1.46
SHR5P41912 SEC65YML105C 822 nt5.91□□□□□ -1.46
SHR5P41912 KSH1YNL024C-A 219 nt5.91□□□□□ -1.46
SHR5P41912 OPI11YPR044C 354 nt5.91□□□□□ -1.46
SHR5P41912 EFM2YBR271W 1260 nt5.91□□□□□ -1.46
SHR5P41912 OSW2YLR054C 2175 nt5.91□□□□□ -1.46
SHR5P41912 GPD2YOL059W 1323 nt5.91□□□□□ -1.46
SHR5P41912 LCB2YDR062W 1686 nt5.91□□□□□ -1.46
SHR5P41912 MRE11YMR224C 2079 nt5.9□□□□□ -1.46
SHR5P41912 KAR5YMR065W 1515 nt5.9□□□□□ -1.46
SHR5P41912 ZWF1YNL241C 1518 nt5.9□□□□□ -1.46
SHR5P41912 PPH22YDL188C 1134 nt5.9□□□□□ -1.46
SHR5P41912 YHR112CYHR112C 1137 nt5.9□□□□□ -1.46
SHR5P41912 TOM40YMR203W 1164 nt5.9□□□□□ -1.46
SHR5P41912 YNL134CYNL134C 1131 nt5.9□□□□□ -1.46
SHR5P41912 SSU72YNL222W 621 nt5.9□□□□□ -1.46
SHR5P41912 RDL2YOR286W 450 nt5.9□□□□□ -1.46
SHR5P41912 HXT7YDR342C 1713 nt5.9□□□□□ -1.47
SHR5P41912 HXT6YDR343C 1713 nt5.9□□□□□ -1.47
SHR5P41912 SEC18YBR080C 2277 nt5.89□□□□□ -1.47
SHR5P41912 ENT5YDR153C 1236 nt5.89□□□□□ -1.47
SHR5P41912 YDR282CYDR282C 1245 nt5.89□□□□□ -1.47
SHR5P41912 CUP2YGL166W 678 nt5.89□□□□□ -1.47
SHR5P41912 TDH2YJR009C 999 nt5.89□□□□□ -1.47
SHR5P41912 YJR107WYJR107W 987 nt5.89□□□□□ -1.47
SHR5P41912 YML090WYML090W 387 nt5.89□□□□□ -1.47
SHR5P41912 GLC8YMR311C 690 nt5.89□□□□□ -1.47
SHR5P41912 YNR014WYNR014W 639 nt5.89□□□□□ -1.47
SHR5P41912 YPL250W-AYPL250W-A 288 nt5.89□□□□□ -1.47
SHR5P41912 CDC1YDR182W 1476 nt5.89□□□□□ -1.47
SHR5P41912 EDE1YBL047C 4146 nt5.89□□□□□ -1.47
SHR5P41912 HXT17YNR072W 1695 nt5.88□□□□□ -1.47
SHR5P41912 MKC7YDR144C 1791 nt5.88□□□□□ -1.47
SHR5P41912 YDR187CYDR187C 519 nt5.88□□□□□ -1.47
SHR5P41912 POP6YGR030C 477 nt5.88□□□□□ -1.47
SHR5P41912 NTG1YAL015C 1200 nt5.88□□□□□ -1.47
SHR5P41912 YLR124WYLR124W 345 nt5.88□□□□□ -1.47
SHR5P41912 ADD37YMR184W 597 nt5.88□□□□□ -1.47
SHR5P41912 SLM4YBR077C 489 nt5.88□□□□□ -1.47
SHR5P41912 YDL114WYDL114W 927 nt5.87□□□□□ -1.47
SHR5P41912 FYV1YDR024W 486 nt5.87□□□□□ -1.47
SHR5P41912 BUD16YEL029C 939 nt5.87□□□□□ -1.47
SHR5P41912 PRS2YER099C 957 nt5.87□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms