Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 GET3YDL100C 1065 nt7.53□□□□□ -1.2
UFD2P54860 YDR222WYDR222W 1248 nt7.53□□□□□ -1.2
UFD2P54860 CUP2YGL166W 678 nt7.53□□□□□ -1.2
UFD2P54860 TFG2YGR005C 1203 nt7.53□□□□□ -1.2
UFD2P54860 YLF2YHL014C 1218 nt7.53□□□□□ -1.2
UFD2P54860 DID2YKR035W-A 615 nt7.53□□□□□ -1.2
UFD2P54860 YMR122CYMR122C 375 nt7.53□□□□□ -1.2
UFD2P54860 OSW1YOR255W 837 nt7.53□□□□□ -1.2
UFD2P54860 TAE1YBR261C 699 nt7.53□□□□□ -1.2
UFD2P54860 CMK1YFR014C 1341 nt7.52□□□□□ -1.2
UFD2P54860 WTM1YOR230W 1314 nt7.52□□□□□ -1.2
UFD2P54860 CMR1YDL156W 1569 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)BtG(GCC)B 71 nt7.52□□□□□ -1.21
UFD2P54860 SUF16tG(GCC)C 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)D1tG(GCC)D1 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)D2tG(GCC)D2 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)EtG(GCC)E 71 nt7.52□□□□□ -1.21
UFD2P54860 SUF20tG(GCC)F1 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)F2tG(GCC)F2 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)G1tG(GCC)G1 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)G2tG(GCC)G2 71 nt7.52□□□□□ -1.21
UFD2P54860 GTT3YEL017W 1014 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)J1tG(GCC)J1 71 nt7.52□□□□□ -1.21
UFD2P54860 SUF23tG(GCC)J2 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)MtG(GCC)M 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)O1tG(GCC)O1 71 nt7.52□□□□□ -1.21
UFD2P54860 SUF17tG(GCC)O2 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)P1tG(GCC)P1 71 nt7.52□□□□□ -1.21
UFD2P54860 tG(GCC)P2tG(GCC)P2 71 nt7.52□□□□□ -1.21
UFD2P54860 ATG36YJL185C 882 nt7.52□□□□□ -1.21
UFD2P54860 ATG19YOL082W 1248 nt7.52□□□□□ -1.21
UFD2P54860 CTF19YPL018W 1110 nt7.52□□□□□ -1.21
UFD2P54860 RER1YCL001W 567 nt7.52□□□□□ -1.21
UFD2P54860 MIP1YOR330C 3765 nt7.52□□□□□ -1.21
UFD2P54860 TAH11YJR046W 1815 nt7.52□□□□□ -1.21
UFD2P54860 RRP17YDR412W 708 nt7.51□□□□□ -1.21
UFD2P54860 YEL075W-AYEL075W-A 612 nt7.51□□□□□ -1.21
UFD2P54860 SAW1YAL027W 786 nt7.51□□□□□ -1.21
UFD2P54860 CDA2YLR308W 939 nt7.51□□□□□ -1.21
UFD2P54860 YLR463CYLR463C 552 nt7.51□□□□□ -1.21
UFD2P54860 CTL1YMR180C 963 nt7.51□□□□□ -1.21
UFD2P54860 RFC4YOL094C 972 nt7.51□□□□□ -1.21
UFD2P54860 ATP4YPL078C 735 nt7.51□□□□□ -1.21
UFD2P54860 RGT2YDL138W 2292 nt7.5□□□□□ -1.21
UFD2P54860 MMR1YLR190W 1476 nt7.5□□□□□ -1.21
UFD2P54860 YBR241CYBR241C 1467 nt7.5□□□□□ -1.21
UFD2P54860 RRP9YPR137W 1722 nt7.5□□□□□ -1.21
UFD2P54860 FYV1YDR024W 486 nt7.5□□□□□ -1.21
UFD2P54860 VMA3YEL027W 483 nt7.5□□□□□ -1.21
UFD2P54860 DFR1YOR236W 636 nt7.5□□□□□ -1.21
UFD2P54860 UIP5YKR044W 1332 nt7.5□□□□□ -1.21
UFD2P54860 YDR514CYDR514C 1452 nt7.49□□□□□ -1.21
UFD2P54860 FAL1YDR021W 1200 nt7.49□□□□□ -1.21
UFD2P54860 YGR011WYGR011W 327 nt7.49□□□□□ -1.21
UFD2P54860 TDH2YJR009C 999 nt7.49□□□□□ -1.21
UFD2P54860 EFM3YJR129C 1020 nt7.49□□□□□ -1.21
UFD2P54860 PSR1YLL010C 1284 nt7.49□□□□□ -1.21
UFD2P54860 PML1YLR016C 615 nt7.49□□□□□ -1.21
UFD2P54860 BLS1YLR408C 369 nt7.49□□□□□ -1.21
UFD2P54860 MER1YNL210W 813 nt7.49□□□□□ -1.21
UFD2P54860 YPL257WYPL257W 582 nt7.49□□□□□ -1.21
UFD2P54860 SLM4YBR077C 489 nt7.49□□□□□ -1.21
UFD2P54860 GPH1YPR160W 2709 nt7.48□□□□□ -1.21
UFD2P54860 MRPL32YCR003W 552 nt7.48□□□□□ -1.21
UFD2P54860 GRX6YDL010W 696 nt7.48□□□□□ -1.21
UFD2P54860 ENT5YDR153C 1236 nt7.48□□□□□ -1.21
UFD2P54860 HHY1YEL059W 309 nt7.48□□□□□ -1.21
UFD2P54860 WSS1YHR134W 810 nt7.48□□□□□ -1.21
UFD2P54860 DPH5YLR172C 903 nt7.48□□□□□ -1.21
UFD2P54860 YML018CYML018C 1182 nt7.48□□□□□ -1.21
UFD2P54860 SNN1YNL086W 309 nt7.48□□□□□ -1.21
UFD2P54860 CSG2YBR036C 1233 nt7.48□□□□□ -1.21
UFD2P54860 SGF29YCL010C 780 nt7.48□□□□□ -1.21
UFD2P54860 CYB2YML054C 1776 nt7.48□□□□□ -1.21
UFD2P54860 ZWF1YNL241C 1518 nt7.47□□□□□ -1.21
UFD2P54860 YFL052WYFL052W 1398 nt7.47□□□□□ -1.21
UFD2P54860 RTT103YDR289C 1230 nt7.47□□□□□ -1.21
UFD2P54860 LYS1YIR034C 1122 nt7.47□□□□□ -1.21
UFD2P54860 YJR146WYJR146W 354 nt7.47□□□□□ -1.21
UFD2P54860 YNR014WYNR014W 639 nt7.47□□□□□ -1.21
UFD2P54860 SRF1YDL133W 1314 nt7.47□□□□□ -1.21
UFD2P54860 GSH1YJL101C 2037 nt7.46□□□□□ -1.22
UFD2P54860 SFT2YBL102W 648 nt7.46□□□□□ -1.22
UFD2P54860 YOR389WYOR389W 1875 nt7.46□□□□□ -1.22
UFD2P54860 ARE2YNR019W 1929 nt7.45□□□□□ -1.22
UFD2P54860 ICL2YPR006C 1728 nt7.45□□□□□ -1.22
UFD2P54860 YDR336WYDR336W 945 nt7.45□□□□□ -1.22
UFD2P54860 TRR1YDR353W 960 nt7.45□□□□□ -1.22
UFD2P54860 ERG26YGL001C 1050 nt7.45□□□□□ -1.22
UFD2P54860 OPI11YPR044C 354 nt7.45□□□□□ -1.22
UFD2P54860 EDE1YBL047C 4146 nt7.44□□□□□ -1.22
UFD2P54860 PPH22YDL188C 1134 nt7.44□□□□□ -1.22
UFD2P54860 PEX7YDR142C 1128 nt7.44□□□□□ -1.22
UFD2P54860 ARI1YGL157W 1044 nt7.44□□□□□ -1.22
UFD2P54860 GUT1YHL032C 2130 nt7.44□□□□□ -1.22
UFD2P54860 MIA40YKL195W 1212 nt7.44□□□□□ -1.22
UFD2P54860 YLL059CYLL059C 507 nt7.44□□□□□ -1.22
UFD2P54860 YOL035CYOL035C 303 nt7.44□□□□□ -1.22
UFD2P54860 YPL014WYPL014W 1146 nt7.44□□□□□ -1.22
UFD2P54860 YMR279CYMR279C 1623 nt7.44□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 76.7 ms