Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 tG(GCC)D2tG(GCC)D2 71 nt7.84□□□□□ -1.15
SSF1P38789 tG(GCC)EtG(GCC)E 71 nt7.84□□□□□ -1.15
SSF1P38789 SUF20tG(GCC)F1 71 nt7.84□□□□□ -1.15
SSF1P38789 tG(GCC)F2tG(GCC)F2 71 nt7.84□□□□□ -1.15
SSF1P38789 tG(GCC)G1tG(GCC)G1 71 nt7.84□□□□□ -1.15
SSF1P38789 tG(GCC)G2tG(GCC)G2 71 nt7.84□□□□□ -1.15
SSF1P38789 tG(GCC)J1tG(GCC)J1 71 nt7.84□□□□□ -1.15
SSF1P38789 VMA3YEL027W 483 nt7.84□□□□□ -1.15
SSF1P38789 SUF23tG(GCC)J2 71 nt7.84□□□□□ -1.15
SSF1P38789 tG(GCC)MtG(GCC)M 71 nt7.84□□□□□ -1.15
SSF1P38789 tG(GCC)O1tG(GCC)O1 71 nt7.84□□□□□ -1.15
SSF1P38789 SUF17tG(GCC)O2 71 nt7.84□□□□□ -1.15
SSF1P38789 tG(GCC)P1tG(GCC)P1 71 nt7.84□□□□□ -1.15
SSF1P38789 tG(GCC)P2tG(GCC)P2 71 nt7.84□□□□□ -1.15
SSF1P38789 SSP2YOR242C 1116 nt7.84□□□□□ -1.15
SSF1P38789 TAH11YJR046W 1815 nt7.84□□□□□ -1.15
SSF1P38789 UIP5YKR044W 1332 nt7.83□□□□□ -1.16
SSF1P38789 STT3YGL022W 2157 nt7.83□□□□□ -1.16
SSF1P38789 SAY1YGR263C 1275 nt7.83□□□□□ -1.16
SSF1P38789 MED6YHR058C 888 nt7.83□□□□□ -1.16
SSF1P38789 UBC12YLR306W 567 nt7.83□□□□□ -1.16
SSF1P38789 MRPL4YLR439W 960 nt7.83□□□□□ -1.16
SSF1P38789 DSC2YOL073C 969 nt7.83□□□□□ -1.16
SSF1P38789 CYB2YML054C 1776 nt7.83□□□□□ -1.16
SSF1P38789 CCT8YJL008C 1707 nt7.83□□□□□ -1.16
SSF1P38789 BNA5YLR231C 1362 nt7.83□□□□□ -1.16
SSF1P38789 CLB5YPR120C 1308 nt7.82□□□□□ -1.16
SSF1P38789 YDR187CYDR187C 519 nt7.82□□□□□ -1.16
SSF1P38789 YJR146WYJR146W 354 nt7.82□□□□□ -1.16
SSF1P38789 YMR122CYMR122C 375 nt7.82□□□□□ -1.16
SSF1P38789 KSH1YNL024C-A 219 nt7.82□□□□□ -1.16
SSF1P38789 SRV2YNL138W 1581 nt7.82□□□□□ -1.16
SSF1P38789 RUF23RUF23 254 nt7.82□□□□□ -1.16
SSF1P38789 PCL1YNL289W 840 nt7.82□□□□□ -1.16
SSF1P38789 YOR020W-AYOR020W-A 273 nt7.82□□□□□ -1.16
SSF1P38789 CTF19YPL018W 1110 nt7.81□□□□□ -1.16
SSF1P38789 TAE1YBR261C 699 nt7.81□□□□□ -1.16
SSF1P38789 ZWF1YNL241C 1518 nt7.81□□□□□ -1.16
SSF1P38789 CDC1YDR182W 1476 nt7.81□□□□□ -1.16
SSF1P38789 MSB3YNL293W 1902 nt7.8□□□□□ -1.16
SSF1P38789 IPI3YNL182C 1668 nt7.8□□□□□ -1.16
SSF1P38789 RIX7YLL034C 2514 nt7.8□□□□□ -1.16
SSF1P38789 EDE1YBL047C 4146 nt7.8□□□□□ -1.16
SSF1P38789 YDL121CYDL121C 450 nt7.8□□□□□ -1.16
SSF1P38789 FAL1YDR021W 1200 nt7.8□□□□□ -1.16
SSF1P38789 HHY1YEL059W 309 nt7.8□□□□□ -1.16
SSF1P38789 NCS6YGL211W 1080 nt7.8□□□□□ -1.16
SSF1P38789 YGR011WYGR011W 327 nt7.8□□□□□ -1.16
SSF1P38789 YHR022CYHR022C 771 nt7.8□□□□□ -1.16
SSF1P38789 LYS1YIR034C 1122 nt7.8□□□□□ -1.16
SSF1P38789 TDH2YJR009C 999 nt7.8□□□□□ -1.16
SSF1P38789 PSR1YLL010C 1284 nt7.8□□□□□ -1.16
SSF1P38789 OGG1YML060W 1131 nt7.8□□□□□ -1.16
SSF1P38789 OPI11YPR044C 354 nt7.8□□□□□ -1.16
SSF1P38789 UBS1YBR165W 834 nt7.8□□□□□ -1.16
SSF1P38789 PEX34YCL056C 435 nt7.8□□□□□ -1.16
SSF1P38789 NMT1YLR195C 1368 nt7.8□□□□□ -1.16
SSF1P38789 CCT3YJL014W 1605 nt7.79□□□□□ -1.16
SSF1P38789 CDC34YDR054C 888 nt7.79□□□□□ -1.16
SSF1P38789 TRP4YDR354W 1143 nt7.79□□□□□ -1.16
SSF1P38789 IRC7YFR055W 1023 nt7.79□□□□□ -1.16
SSF1P38789 DUO1YGL061C 744 nt7.79□□□□□ -1.16
SSF1P38789 CUP2YGL166W 678 nt7.79□□□□□ -1.16
SSF1P38789 ERP2YAL007C 648 nt7.79□□□□□ -1.16
SSF1P38789 GCN3YKR026C 918 nt7.79□□□□□ -1.16
SSF1P38789 IMD1YAR073W 1212 nt7.79□□□□□ -1.16
SSF1P38789 SFT2YBL102W 648 nt7.79□□□□□ -1.16
SSF1P38789 YPR109WYPR109W 885 nt7.79□□□□□ -1.16
SSF1P38789 RRP9YPR137W 1722 nt7.78□□□□□ -1.16
SSF1P38789 YDL157CYDL157C 357 nt7.78□□□□□ -1.16
SSF1P38789 YDR509WYDR509W 348 nt7.78□□□□□ -1.16
SSF1P38789 SPG1YGR236C 288 nt7.78□□□□□ -1.16
SSF1P38789 YAL016C-BYAL016C-B 186 nt7.78□□□□□ -1.16
SSF1P38789 YPL250W-AYPL250W-A 288 nt7.78□□□□□ -1.16
SSF1P38789 YPL257WYPL257W 582 nt7.78□□□□□ -1.16
SSF1P38789 SRP101YDR292C 1866 nt7.78□□□□□ -1.16
SSF1P38789 SMF3YLR034C 1422 nt7.78□□□□□ -1.16
SSF1P38789 EMW1YNL313C 2715 nt7.77□□□□□ -1.17
SSF1P38789 MSS1YMR023C 1581 nt7.77□□□□□ -1.17
SSF1P38789 YKL169CYKL169C 384 nt7.77□□□□□ -1.17
SSF1P38789 MRPS8YMR158W 468 nt7.77□□□□□ -1.17
SSF1P38789 RPC19YNL113W 429 nt7.77□□□□□ -1.17
SSF1P38789 YNR014WYNR014W 639 nt7.77□□□□□ -1.17
SSF1P38789 RPO26YPR187W 468 nt7.77□□□□□ -1.17
SSF1P38789 DXO1YDR370C 1329 nt7.77□□□□□ -1.17
SSF1P38789 LAP2YNL045W 2016 nt7.76□□□□□ -1.17
SSF1P38789 HXT15YDL245C 1704 nt7.76□□□□□ -1.17
SSF1P38789 HXT16YJR158W 1704 nt7.76□□□□□ -1.17
SSF1P38789 FYV1YDR024W 486 nt7.76□□□□□ -1.17
SSF1P38789 COX3Q0275 810 nt7.76□□□□□ -1.17
SSF1P38789 NTG1YAL015C 1200 nt7.76□□□□□ -1.17
SSF1P38789 MIA40YKL195W 1212 nt7.76□□□□□ -1.17
SSF1P38789 SEC18YBR080C 2277 nt7.76□□□□□ -1.17
SSF1P38789 SGE1YPR198W 1632 nt7.75□□□□□ -1.17
SSF1P38789 PPH22YDL188C 1134 nt7.75□□□□□ -1.17
SSF1P38789 YDR415CYDR415C 1125 nt7.75□□□□□ -1.17
SSF1P38789 YLF2YHL014C 1218 nt7.75□□□□□ -1.17
SSF1P38789 DID2YKR035W-A 615 nt7.75□□□□□ -1.17
SSF1P38789 SPC34YKR037C 888 nt7.75□□□□□ -1.17
SSF1P38789 SCS7YMR272C 1155 nt7.75□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 80.4 ms