Protein–RNA interactions for Protein: P21771

MRPS28, 37S ribosomal protein S28, mitochondrial, yeast

Predictions only

Length 286 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	P21771	LGE1	YPL055C	999 nt		5.84	□□□□□ -1.47
MRPS28	P21771	COX11	YPL132W	903 nt		5.84	□□□□□ -1.47
MRPS28	P21771	ILV1	YER086W	1731 nt		5.84	□□□□□ -1.47
MRPS28	P21771	ERG1	YGR175C	1491 nt		5.83	□□□□□ -1.48
MRPS28	P21771	RIX7	YLL034C	2514 nt		5.83	□□□□□ -1.48
MRPS28	P21771	SSK1	YLR006C	2139 nt		5.83	□□□□□ -1.48
MRPS28	P21771	TKL1	YPR074C	2043 nt		5.83	□□□□□ -1.48
MRPS28	P21771	GPD1	YDL022W	1176 nt		5.83	□□□□□ -1.48
MRPS28	P21771	HAP2	YGL237C	798 nt		5.83	□□□□□ -1.48
MRPS28	P21771	RME1	YGR044C	903 nt		5.83	□□□□□ -1.48
MRPS28	P21771	ASK1	YKL052C	879 nt		5.83	□□□□□ -1.48
MRPS28	P21771	CTF19	YPL018W	1110 nt		5.83	□□□□□ -1.48
MRPS28	P21771	GYP1	YOR070C	1914 nt		5.83	□□□□□ -1.48
MRPS28	P21771	MCM3	YEL032W	2916 nt		5.83	□□□□□ -1.48
MRPS28	P21771	YPK2	YMR104C	2034 nt		5.82	□□□□□ -1.48
MRPS28	P21771	GTO3	YMR251W	1101 nt		5.82	□□□□□ -1.48
MRPS28	P21771	CAM1	YPL048W	1248 nt		5.82	□□□□□ -1.48
MRPS28	P21771	WHI2	YOR043W	1461 nt		5.82	□□□□□ -1.48
MRPS28	P21771	BUG1	YDL099W	1026 nt		5.81	□□□□□ -1.48
MRPS28	P21771	YJR154W	YJR154W	1041 nt		5.81	□□□□□ -1.48
MRPS28	P21771	SRY1	YKL218C	981 nt		5.81	□□□□□ -1.48
MRPS28	P21771	ZIM17	YNL310C	525 nt		5.81	□□□□□ -1.48
MRPS28	P21771	YPR098C	YPR098C	486 nt		5.81	□□□□□ -1.48
MRPS28	P21771	COX15	YER141W	1461 nt		5.81	□□□□□ -1.48
MRPS28	P21771	ICL1	YER065C	1674 nt		5.81	□□□□□ -1.48
MRPS28	P21771	VRP1	YLR337C	2454 nt		5.81	□□□□□ -1.48
MRPS28	P21771	VPS1	YKR001C	2115 nt		5.8	□□□□□ -1.48
MRPS28	P21771	tR(ACG)D	tR(ACG)D	73 nt		5.8	□□□□□ -1.48
MRPS28	P21771	tR(ACG)E	tR(ACG)E	73 nt		5.8	□□□□□ -1.48
MRPS28	P21771	tR(ACG)K	tR(ACG)K	73 nt		5.8	□□□□□ -1.48
MRPS28	P21771	tR(ACG)L	tR(ACG)L	73 nt		5.8	□□□□□ -1.48
MRPS28	P21771	tR(ACG)O	tR(ACG)O	73 nt		5.8	□□□□□ -1.48
MRPS28	P21771	YKL031W	YKL031W	414 nt		5.8	□□□□□ -1.48
MRPS28	P21771	SRL2	YLR082C	1179 nt		5.8	□□□□□ -1.48
MRPS28	P21771	YJL163C	YJL163C	1668 nt		5.79	□□□□□ -1.48
MRPS28	P21771	YDL121C	YDL121C	450 nt		5.79	□□□□□ -1.48
MRPS28	P21771	FIT2	YOR382W	462 nt		5.79	□□□□□ -1.48
MRPS28	P21771	SPE3	YPR069C	882 nt		5.79	□□□□□ -1.48
MRPS28	P21771	PTC4	YBR125C	1182 nt		5.79	□□□□□ -1.48
MRPS28	P21771	DIA3	YDL024C	1407 nt		5.79	□□□□□ -1.48
MRPS28	P21771	ZWF1	YNL241C	1518 nt		5.79	□□□□□ -1.48
MRPS28	P21771	RPS3	YNL178W	723 nt		5.78	□□□□□ -1.48
MRPS28	P21771	PDH1	YPR002W	1551 nt		5.78	□□□□□ -1.48
MRPS28	P21771	snR32	snR32	188 nt		5.78	□□□□□ -1.48
MRPS28	P21771	CCT8	YJL008C	1707 nt		5.77	□□□□□ -1.49
MRPS28	P21771	YKL102C	YKL102C	306 nt		5.77	□□□□□ -1.49
MRPS28	P21771	YHM2	YMR241W	945 nt		5.77	□□□□□ -1.49
MRPS28	P21771	MDY2	YOL111C	639 nt		5.77	□□□□□ -1.49
MRPS28	P21771	YPR076W	YPR076W	375 nt		5.77	□□□□□ -1.49
MRPS28	P21771	PLB3	YOL011W	2061 nt		5.77	□□□□□ -1.49
MRPS28	P21771	RBS1	YDL189W	1374 nt		5.77	□□□□□ -1.49
MRPS28	P21771	YIL060W	YIL060W	435 nt		5.76	□□□□□ -1.49
MRPS28	P21771	MRPL15	YLR312W-A	762 nt		5.76	□□□□□ -1.49
MRPS28	P21771	PUS4	YNL292W	1212 nt		5.76	□□□□□ -1.49
MRPS28	P21771	RBD2	YPL246C	789 nt		5.76	□□□□□ -1.49
MRPS28	P21771	SUE1	YPR151C	621 nt		5.76	□□□□□ -1.49
MRPS28	P21771	DPH2	YKL191W	1605 nt		5.76	□□□□□ -1.49
MRPS28	P21771	SNU71	YGR013W	1863 nt		5.75	□□□□□ -1.49
MRPS28	P21771	YOL046C	YOL046C	675 nt		5.75	□□□□□ -1.49
MRPS28	P21771	SSY5	YJL156C	2100 nt		5.75	□□□□□ -1.49
MRPS28	P21771	VTH1	YIL173W	4650 nt		5.74	□□□□□ -1.49
MRPS28	P21771	VTH2	YJL222W	4650 nt		5.74	□□□□□ -1.49
MRPS28	P21771	SSZ1	YHR064C	1617 nt		5.74	□□□□□ -1.49
MRPS28	P21771	TRP5	YGL026C	2124 nt		5.74	□□□□□ -1.49
MRPS28	P21771	POR2	YIL114C	846 nt		5.74	□□□□□ -1.49
MRPS28	P21771	GFD1	YMR255W	567 nt		5.74	□□□□□ -1.49
MRPS28	P21771	MSO1	YNR049C	633 nt		5.74	□□□□□ -1.49
MRPS28	P21771	MCX1	YBR227C	1563 nt		5.74	□□□□□ -1.49
MRPS28	P21771	EXO1	YOR033C	2109 nt		5.74	□□□□□ -1.49
MRPS28	P21771	RPT4	YOR259C	1314 nt		5.74	□□□□□ -1.49
MRPS28	P21771	BNA5	YLR231C	1362 nt		5.73	□□□□□ -1.49
MRPS28	P21771	PPH21	YDL134C	1110 nt		5.73	□□□□□ -1.49
MRPS28	P21771	MRF1	YGL143C	1242 nt		5.73	□□□□□ -1.49
MRPS28	P21771	DBP8	YHR169W	1296 nt		5.73	□□□□□ -1.49
MRPS28	P21771	HOC1	YJR075W	1191 nt		5.73	□□□□□ -1.49
MRPS28	P21771	RRS1	YOR294W	612 nt		5.73	□□□□□ -1.49
MRPS28	P21771	TAE1	YBR261C	699 nt		5.73	□□□□□ -1.49
MRPS28	P21771	GRS1	YBR121C	2004 nt		5.73	□□□□□ -1.49
MRPS28	P21771	MPA43	YNL249C	1629 nt		5.73	□□□□□ -1.49
MRPS28	P21771	FET3	YMR058W	1911 nt		5.72	□□□□□ -1.49
MRPS28	P21771	MPH3	YJR160C	1809 nt		5.72	□□□□□ -1.49
MRPS28	P21771	TSA1	YML028W	591 nt		5.72	□□□□□ -1.49
MRPS28	P21771	PGA2	YNL149C	390 nt		5.72	□□□□□ -1.49
MRPS28	P21771	BIO3	YNR058W	1443 nt		5.72	□□□□□ -1.49
MRPS28	P21771	YNL095C	YNL095C	1929 nt		5.72	□□□□□ -1.49
MRPS28	P21771	PWP1	YLR196W	1731 nt		5.71	□□□□□ -1.49
MRPS28	P21771	KSS1	YGR040W	1107 nt		5.71	□□□□□ -1.5
MRPS28	P21771	LIA1	YJR070C	978 nt		5.71	□□□□□ -1.5
MRPS28	P21771	STM1	YLR150W	822 nt		5.71	□□□□□ -1.5
MRPS28	P21771	YPL062W	YPL062W	405 nt		5.71	□□□□□ -1.5
MRPS28	P21771	ASR1	YPR093C	867 nt		5.71	□□□□□ -1.5
MRPS28	P21771	PMT2	YAL023C	2280 nt		5.71	□□□□□ -1.5
MRPS28	P21771	YRF1-4	YLR466W	4149 nt		5.7	□□□□□ -1.5
MRPS28	P21771	ACS2	YLR153C	2052 nt		5.7	□□□□□ -1.5
MRPS28	P21771	YKR041W	YKR041W	753 nt		5.7	□□□□□ -1.5
MRPS28	P21771	LDB7	YBL006C	543 nt		5.7	□□□□□ -1.5
MRPS28	P21771	YOR111W	YOR111W	699 nt		5.7	□□□□□ -1.5
MRPS28	P21771	SEC12	YNR026C	1416 nt		5.7	□□□□□ -1.5
MRPS28	P21771	CYK3	YDL117W	2658 nt		5.69	□□□□□ -1.5
MRPS28	P21771	BUB3	YOR026W	1026 nt		5.69	□□□□□ -1.5

Retrieved 100 of 7,029 protein–RNA pairs in 110 ms