Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 YUR1YJL139C 1287 nt6.67□□□□□ -1.34
NPL3Q01560 ATP12YJL180C 978 nt6.67□□□□□ -1.34 RIP-Chip
NPL3Q01560 YLR311CYLR311C 348 nt6.67□□□□□ -1.34
NPL3Q01560 SPG5YMR191W 1122 nt6.67□□□□□ -1.34
NPL3Q01560 SCP1YOR367W 603 nt6.67□□□□□ -1.34 RIP-Chip
NPL3Q01560 YOS9YDR057W 1629 nt6.67□□□□□ -1.34
NPL3Q01560 MKK1YOR231W 1527 nt6.66□□□□□ -1.34
NPL3Q01560 YDR541CYDR541C 1035 nt6.66□□□□□ -1.34
NPL3Q01560 MED6YHR058C 888 nt6.66□□□□□ -1.34 RIP-Chip
NPL3Q01560 AIM20YIL158W 615 nt6.66□□□□□ -1.34 RIP-Chip
NPL3Q01560 MHO1YJR008W 1017 nt6.66□□□□□ -1.34
NPL3Q01560 YLR036CYLR036C 612 nt6.66□□□□□ -1.34 RIP-Chip
NPL3Q01560 MSC3YLR219W 2187 nt6.66□□□□□ -1.34
NPL3Q01560 VHS1YDR247W 1386 nt6.66□□□□□ -1.34
NPL3Q01560 CRF1YDR223W 1404 nt6.66□□□□□ -1.34
NPL3Q01560 FRE5YOR384W 2085 nt6.65□□□□□ -1.34
NPL3Q01560 ASN2YGR124W 1719 nt6.65□□□□□ -1.34 RIP-Chip
NPL3Q01560 SKI8YGL213C 1194 nt6.65□□□□□ -1.34
NPL3Q01560 EFM3YJR129C 1020 nt6.65□□□□□ -1.34 RIP-Chip
NPL3Q01560 CTR3YLR411W 726 nt6.65□□□□□ -1.34
NPL3Q01560 UBA3YPR066W 900 nt6.65□□□□□ -1.34
NPL3Q01560 SNT309YPR101W 528 nt6.65□□□□□ -1.34 RIP-Chip
NPL3Q01560 AME1YBR211C 975 nt6.65□□□□□ -1.34 RIP-Chip
NPL3Q01560 YMR034CYMR034C 1305 nt6.65□□□□□ -1.35
NPL3Q01560 BNA5YLR231C 1362 nt6.65□□□□□ -1.35
NPL3Q01560 SEC23YPR181C 2307 nt6.65□□□□□ -1.35
NPL3Q01560 MRPS28YDR337W 861 nt6.64□□□□□ -1.35
NPL3Q01560 YAL016C-BYAL016C-B 186 nt6.64□□□□□ -1.35
NPL3Q01560 RPL31BYLR406C 342 nt6.64□□□□□ -1.35 RIP-Chip
NPL3Q01560 YDR514CYDR514C 1452 nt6.64□□□□□ -1.35
NPL3Q01560 LCL3YGL085W 825 nt6.63□□□□□ -1.35
NPL3Q01560 RPL2BYIL018W 765 nt6.63□□□□□ -1.35
NPL3Q01560 IMD1YAR073W 1212 nt6.63□□□□□ -1.35
NPL3Q01560 ARC35YNR035C 1029 nt6.63□□□□□ -1.35
NPL3Q01560 SMK1YPR054W 1167 nt6.63□□□□□ -1.35
NPL3Q01560 TOS2YGR221C 1869 nt6.62□□□□□ -1.35
NPL3Q01560 EFM1YHL039W 1758 nt6.62□□□□□ -1.35
NPL3Q01560 CYB2YML054C 1776 nt6.62□□□□□ -1.35
NPL3Q01560 CLN1YMR199W 1641 nt6.62□□□□□ -1.35
NPL3Q01560 CRH1YGR189C 1524 nt6.62□□□□□ -1.35
NPL3Q01560 TUF1YOR187W 1314 nt6.62□□□□□ -1.35
NPL3Q01560 DIN7YDR263C 1293 nt6.62□□□□□ -1.35
NPL3Q01560 ASF1YJL115W 840 nt6.62□□□□□ -1.35 RIP-Chip
NPL3Q01560 PFA4YOL003C 1137 nt6.62□□□□□ -1.35
NPL3Q01560 CDC34YDR054C 888 nt6.61□□□□□ -1.35
NPL3Q01560 GTT3YEL017W 1014 nt6.61□□□□□ -1.35
NPL3Q01560 YGL101WYGL101W 648 nt6.61□□□□□ -1.35 RIP-Chip
NPL3Q01560 MTR3YGR158C 753 nt6.61□□□□□ -1.35 RIP-Chip
NPL3Q01560 SWD1YAR003W 1281 nt6.61□□□□□ -1.35
NPL3Q01560 YMR075C-AYMR075C-A 366 nt6.61□□□□□ -1.35
NPL3Q01560 OSW5YMR148W 447 nt6.61□□□□□ -1.35 RIP-Chip
NPL3Q01560 FET4YMR319C 1659 nt6.61□□□□□ -1.35
NPL3Q01560 AMN1YBR158W 1650 nt6.61□□□□□ -1.35
NPL3Q01560 SRV2YNL138W 1581 nt6.61□□□□□ -1.35
NPL3Q01560 MCH2YKL221W 1422 nt6.6□□□□□ -1.35
NPL3Q01560 KNS1YLL019C 2214 nt6.6□□□□□ -1.35
NPL3Q01560 CEM1YER061C 1329 nt6.6□□□□□ -1.35
NPL3Q01560 HED1YDR014W-A 489 nt6.6□□□□□ -1.35
NPL3Q01560 MRPL28YDR462W 444 nt6.6□□□□□ -1.35 RIP-Chip
NPL3Q01560 NCS6YGL211W 1080 nt6.6□□□□□ -1.35 RIP-Chip
NPL3Q01560 HMS2YJR147W 1077 nt6.6□□□□□ -1.35
NPL3Q01560 TAF9YMR236W 474 nt6.6□□□□□ -1.35 RIP-Chip
NPL3Q01560 SCS22YBL091C-A 528 nt6.6□□□□□ -1.35
NPL3Q01560 tR(UCU)Q1tR(UCU)Q1 73 nt6.59□□□□□ -1.35
NPL3Q01560 FMO1YHR176W 1299 nt6.59□□□□□ -1.35
NPL3Q01560 TPK1YJL164C 1194 nt6.59□□□□□ -1.35
NPL3Q01560 YKL153WYKL153W 510 nt6.59□□□□□ -1.35
NPL3Q01560 MRPL4YLR439W 960 nt6.59□□□□□ -1.35 RIP-Chip
NPL3Q01560 MRPS18YNL306W 654 nt6.59□□□□□ -1.35
NPL3Q01560 HRT1YOL133W 366 nt6.59□□□□□ -1.35 RIP-Chip
NPL3Q01560 TMA46YOR091W 1038 nt6.59□□□□□ -1.35
NPL3Q01560 LSC1YOR142W 990 nt6.59□□□□□ -1.35
NPL3Q01560 RPO26YPR187W 468 nt6.59□□□□□ -1.35 RIP-Chip
NPL3Q01560 YDL121CYDL121C 450 nt6.58□□□□□ -1.36
NPL3Q01560 ERV14YGL054C 417 nt6.58□□□□□ -1.36
NPL3Q01560 YHL045WYHL045W 348 nt6.58□□□□□ -1.36
NPL3Q01560 YIL029W-AYIL029W-A 372 nt6.58□□□□□ -1.36
NPL3Q01560 NTG1YAL015C 1200 nt6.58□□□□□ -1.36
NPL3Q01560 PSR1YLL010C 1284 nt6.58□□□□□ -1.36
NPL3Q01560 RPC19YNL113W 429 nt6.58□□□□□ -1.36 RIP-Chip
NPL3Q01560 VAM3YOR106W 852 nt6.58□□□□□ -1.36
NPL3Q01560 SEC62YPL094C 825 nt6.58□□□□□ -1.36 RIP-Chip
NPL3Q01560 YPR109WYPR109W 885 nt6.58□□□□□ -1.36 RIP-Chip
NPL3Q01560 CLB5YPR120C 1308 nt6.57□□□□□ -1.36 RIP-Chip
NPL3Q01560 IMG1YCR046C 510 nt6.57□□□□□ -1.36 RIP-Chip
NPL3Q01560 YGR011WYGR011W 327 nt6.57□□□□□ -1.36
NPL3Q01560 CTF8YHR191C 402 nt6.57□□□□□ -1.36
NPL3Q01560 CBR1YIL043C 855 nt6.57□□□□□ -1.36
NPL3Q01560 HSM3YBR272C 1443 nt6.57□□□□□ -1.36
NPL3Q01560 SEC18YBR080C 2277 nt6.56□□□□□ -1.36
NPL3Q01560 STD1YOR047C 1335 nt6.56□□□□□ -1.36 RIP-Chip
NPL3Q01560 YDR387CYDR387C 1668 nt6.56□□□□□ -1.36
NPL3Q01560 YDL177CYDL177C 513 nt6.56□□□□□ -1.36
NPL3Q01560 IRC7YFR055W 1023 nt6.56□□□□□ -1.36 RIP-Chip
NPL3Q01560 YSC83YHR017W 1158 nt6.56□□□□□ -1.36 RIP-Chip
NPL3Q01560 ERP2YAL007C 648 nt6.56□□□□□ -1.36
NPL3Q01560 YKL102CYKL102C 306 nt6.56□□□□□ -1.36
NPL3Q01560 YKL169CYKL169C 384 nt6.56□□□□□ -1.36
NPL3Q01560 UBC12YLR306W 567 nt6.56□□□□□ -1.36
NPL3Q01560 YOR020W-AYOR020W-A 273 nt6.56□□□□□ -1.36 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms