Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.64■■□□□ 1.21
PCDHGA9Q9Y5G4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGA9Q9Y5G4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGA9Q9Y5G4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHGA9Q9Y5G4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA9Q9Y5G4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHGA9Q9Y5G4 AC019171.1-201ENST00000601251 1056 ntBASIC22.63■■□□□ 1.21
PCDHGA9Q9Y5G4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA9Q9Y5G4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA9Q9Y5G4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 AL031848.2-201ENST00000607670 837 ntBASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHGA9Q9Y5G4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDHGA9Q9Y5G4 AC103724.3-201ENST00000564481 992 ntBASIC22.61■■□□□ 1.21
PCDHGA9Q9Y5G4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHGA9Q9Y5G4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA9Q9Y5G4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHGA9Q9Y5G4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
PCDHGA9Q9Y5G4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.6■■□□□ 1.21
PCDHGA9Q9Y5G4 AC131212.1-201ENST00000613771 668 ntBASIC22.6■■□□□ 1.21
PCDHGA9Q9Y5G4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
PCDHGA9Q9Y5G4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 WHAMMP3-201ENST00000611636 1609 ntBASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.59■■□□□ 1.21
PCDHGA9Q9Y5G4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA9Q9Y5G4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA9Q9Y5G4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA9Q9Y5G4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA9Q9Y5G4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGA9Q9Y5G4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 THA1P-201ENST00000590384 1145 ntBASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDHGA9Q9Y5G4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA9Q9Y5G4 AC087393.1-201ENST00000582896 145 ntBASIC22.56■■□□□ 1.2
PCDHGA9Q9Y5G4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA9Q9Y5G4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA9Q9Y5G4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGA9Q9Y5G4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHGA9Q9Y5G4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGA9Q9Y5G4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA9Q9Y5G4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHGA9Q9Y5G4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA9Q9Y5G4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGA9Q9Y5G4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PCDHGA9Q9Y5G4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGA9Q9Y5G4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA9Q9Y5G4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGA9Q9Y5G4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA9Q9Y5G4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA9Q9Y5G4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHGA9Q9Y5G4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGA9Q9Y5G4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA9Q9Y5G4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGA9Q9Y5G4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGA9Q9Y5G4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA9Q9Y5G4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA9Q9Y5G4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA9Q9Y5G4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA9Q9Y5G4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGA9Q9Y5G4 AC019069.1-201ENST00000610008 1333 ntBASIC22.51■■□□□ 1.19
PCDHGA9Q9Y5G4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PCDHGA9Q9Y5G4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PCDHGA9Q9Y5G4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGA9Q9Y5G4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGA9Q9Y5G4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHGA9Q9Y5G4 AL356441.2-201ENST00000443009 864 ntBASIC22.49■■□□□ 1.19
PCDHGA9Q9Y5G4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHGA9Q9Y5G4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA9Q9Y5G4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA9Q9Y5G4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGA9Q9Y5G4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms