Protein–RNA interactions for Protein: Q99219

TY3A-I, Transposon Ty3-I Gag polyprotein, yeastyeast

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY3A-IQ99219 SUF20tG(GCC)F1 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 tG(GCC)F2tG(GCC)F2 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 tG(GCC)G1tG(GCC)G1 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 tG(GCC)G2tG(GCC)G2 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 tG(GCC)J1tG(GCC)J1 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 SUF23tG(GCC)J2 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 tG(GCC)MtG(GCC)M 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 tG(GCC)O1tG(GCC)O1 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 SUF17tG(GCC)O2 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 tG(GCC)P1tG(GCC)P1 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 tG(GCC)P2tG(GCC)P2 71 nt6.9□□□□□ -1.3
TY3A-IQ99219 MIA40YKL195W 1212 nt6.9□□□□□ -1.3
TY3A-IQ99219 MEU1YLR017W 1014 nt6.9□□□□□ -1.3
TY3A-IQ99219 ISN1YOR155C 1353 nt6.9□□□□□ -1.31
TY3A-IQ99219 EFM1YHL039W 1758 nt6.9□□□□□ -1.31
TY3A-IQ99219 YDL119CYDL119C 924 nt6.89□□□□□ -1.31
TY3A-IQ99219 JNM1YMR294W 1122 nt6.89□□□□□ -1.31
TY3A-IQ99219 DFR1YOR236W 636 nt6.89□□□□□ -1.31
TY3A-IQ99219 GPA1YHR005C 1419 nt6.89□□□□□ -1.31
TY3A-IQ99219 YDL129WYDL129W 876 nt6.88□□□□□ -1.31
TY3A-IQ99219 RPE1YJL121C 717 nt6.88□□□□□ -1.31
TY3A-IQ99219 DAP1YPL170W 459 nt6.88□□□□□ -1.31
TY3A-IQ99219 ADE12YNL220W 1302 nt6.87□□□□□ -1.31
TY3A-IQ99219 CBP4YGR174C 513 nt6.87□□□□□ -1.31
TY3A-IQ99219 RDN5-2RDN5-2 119 nt6.87□□□□□ -1.31
TY3A-IQ99219 RDN5-3RDN5-3 119 nt6.87□□□□□ -1.31
TY3A-IQ99219 RDN5-4RDN5-4 119 nt6.87□□□□□ -1.31
TY3A-IQ99219 RDN5-5RDN5-5 119 nt6.87□□□□□ -1.31
TY3A-IQ99219 GAT4YIR013C 366 nt6.86□□□□□ -1.31
TY3A-IQ99219 NUP84YDL116W 2181 nt6.86□□□□□ -1.31
TY3A-IQ99219 DAL3YIR032C 588 nt6.85□□□□□ -1.31
TY3A-IQ99219 YHC3YJL059W 1227 nt6.85□□□□□ -1.31
TY3A-IQ99219 PEX13YLR191W 1161 nt6.85□□□□□ -1.31
TY3A-IQ99219 PNP1YLR209C 936 nt6.85□□□□□ -1.31
TY3A-IQ99219 SSP120YLR250W 705 nt6.85□□□□□ -1.31
TY3A-IQ99219 TOS2YGR221C 1869 nt6.84□□□□□ -1.31
TY3A-IQ99219 MTR3YGR158C 753 nt6.84□□□□□ -1.31
TY3A-IQ99219 HEM1YDR232W 1647 nt6.83□□□□□ -1.32
TY3A-IQ99219 LDS1YAL018C 978 nt6.83□□□□□ -1.32
TY3A-IQ99219 YNL120CYNL120C 486 nt6.83□□□□□ -1.32
TY3A-IQ99219 PXL1YKR090W 2121 nt6.83□□□□□ -1.32
TY3A-IQ99219 SKG1YKR100C 1068 nt6.82□□□□□ -1.32
TY3A-IQ99219 RRN10YBL025W 438 nt6.82□□□□□ -1.32
TY3A-IQ99219 GFA1YKL104C 2154 nt6.82□□□□□ -1.32
TY3A-IQ99219 ILV1YER086W 1731 nt6.81□□□□□ -1.32
TY3A-IQ99219 SPT3YDR392W 1014 nt6.81□□□□□ -1.32
TY3A-IQ99219 SNO4YMR322C 714 nt6.81□□□□□ -1.32
TY3A-IQ99219 HSP33YOR391C 714 nt6.81□□□□□ -1.32
TY3A-IQ99219 HSP32YPL280W 714 nt6.81□□□□□ -1.32
TY3A-IQ99219 PRI2YKL045W 1587 nt6.81□□□□□ -1.32
TY3A-IQ99219 GEF1YJR040W 2340 nt6.81□□□□□ -1.32
TY3A-IQ99219 HGH1YGR187C 1185 nt6.8□□□□□ -1.32
TY3A-IQ99219 CIN4YMR138W 576 nt6.8□□□□□ -1.32
TY3A-IQ99219 HSM3YBR272C 1443 nt6.8□□□□□ -1.32
TY3A-IQ99219 FRE5YOR384W 2085 nt6.8□□□□□ -1.32
TY3A-IQ99219 CYB2YML054C 1776 nt6.8□□□□□ -1.32
TY3A-IQ99219 AIM3YBR108W 2844 nt6.79□□□□□ -1.32
TY3A-IQ99219 YML012C-AYML012C-A 378 nt6.79□□□□□ -1.32
TY3A-IQ99219 SMK1YPR054W 1167 nt6.79□□□□□ -1.32
TY3A-IQ99219 MRPS5YBR251W 924 nt6.79□□□□□ -1.32
TY3A-IQ99219 AMD2YDR242W 1650 nt6.79□□□□□ -1.32
TY3A-IQ99219 MCH2YKL221W 1422 nt6.78□□□□□ -1.32
TY3A-IQ99219 AGP2YBR132C 1791 nt6.78□□□□□ -1.32
TY3A-IQ99219 EHD3YDR036C 1503 nt6.78□□□□□ -1.32
TY3A-IQ99219 NTG1YAL015C 1200 nt6.78□□□□□ -1.32
TY3A-IQ99219 LCB3YJL134W 1230 nt6.78□□□□□ -1.32
TY3A-IQ99219 ARC35YNR035C 1029 nt6.78□□□□□ -1.32
TY3A-IQ99219 PUF3YLL013C 2640 nt6.78□□□□□ -1.32
TY3A-IQ99219 GCN3YKR026C 918 nt6.77□□□□□ -1.33
TY3A-IQ99219 MRPL22YNL177C 930 nt6.77□□□□□ -1.33
TY3A-IQ99219 DAL4YIR028W 1908 nt6.77□□□□□ -1.33
TY3A-IQ99219 RGD2YFL047W 2145 nt6.77□□□□□ -1.33
TY3A-IQ99219 YNL042W-BYNL042W-B 258 nt6.76□□□□□ -1.33
TY3A-IQ99219 HSP26YBR072W 645 nt6.76□□□□□ -1.33
TY3A-IQ99219 COR1YBL045C 1374 nt6.76□□□□□ -1.33
TY3A-IQ99219 MRK1YDL079C 1506 nt6.76□□□□□ -1.33
TY3A-IQ99219 TPO3YPR156C 1869 nt6.75□□□□□ -1.33
TY3A-IQ99219 ATG12YBR217W 561 nt6.75□□□□□ -1.33
TY3A-IQ99219 YPT1YFL038C 621 nt6.74□□□□□ -1.33
TY3A-IQ99219 LEU5YHR002W 1074 nt6.74□□□□□ -1.33
TY3A-IQ99219 LDB18YLL049W 540 nt6.74□□□□□ -1.33
TY3A-IQ99219 AAD15YOL165C 432 nt6.74□□□□□ -1.33
TY3A-IQ99219 RRS1YOR294W 612 nt6.74□□□□□ -1.33
TY3A-IQ99219 KTR3YBR205W 1215 nt6.74□□□□□ -1.33
TY3A-IQ99219 VTS1YOR359W 1572 nt6.74□□□□□ -1.33
TY3A-IQ99219 YDL022C-AYDL022C-A 249 nt6.73□□□□□ -1.33
TY3A-IQ99219 YDL057WYDL057W 987 nt6.73□□□□□ -1.33
TY3A-IQ99219 YDR034W-BYDR034W-B 156 nt6.73□□□□□ -1.33
TY3A-IQ99219 YDR415CYDR415C 1125 nt6.73□□□□□ -1.33
TY3A-IQ99219 YFL064CYFL064C 525 nt6.73□□□□□ -1.33
TY3A-IQ99219 MRPS16YPL013C 366 nt6.73□□□□□ -1.33
TY3A-IQ99219 YPR202WYPR202W 717 nt6.73□□□□□ -1.33
TY3A-IQ99219 HBN1YCL026C-B 582 nt6.73□□□□□ -1.33
TY3A-IQ99219 MCH1YDL054C 1461 nt6.73□□□□□ -1.33
TY3A-IQ99219 VMA16YHR026W 642 nt6.72□□□□□ -1.33
TY3A-IQ99219 YNR075C-AYNR075C-A 93 nt6.72□□□□□ -1.33
TY3A-IQ99219 GSH1YJL101C 2037 nt6.72□□□□□ -1.33
TY3A-IQ99219 ACO1YLR304C 2337 nt6.72□□□□□ -1.33
TY3A-IQ99219 ADY2YCR010C 852 nt6.71□□□□□ -1.34
TY3A-IQ99219 ERS1YCR075C 783 nt6.71□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 43.7 ms