Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 HED1YDR014W-A 489 nt5.44□□□□□ -1.54
SSU72P53538 IMA5YJL216C 1746 nt5.44□□□□□ -1.54
SSU72P53538 SML1YML058W 315 nt5.44□□□□□ -1.54
SSU72P53538 NOP2YNL061W 1857 nt5.44□□□□□ -1.54
SSU72P53538 SLA2YNL243W 2907 nt5.44□□□□□ -1.54
SSU72P53538 IRC11YOR013W 471 nt5.44□□□□□ -1.54
SSU72P53538 HST2YPL015C 1074 nt5.44□□□□□ -1.54
SSU72P53538 EIS1YMR031C 2532 nt5.43□□□□□ -1.54
SSU72P53538 NUP49YGL172W 1419 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)BtG(GCC)B 71 nt5.43□□□□□ -1.54
SSU72P53538 SUF16tG(GCC)C 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)D1tG(GCC)D1 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)D2tG(GCC)D2 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)EtG(GCC)E 71 nt5.43□□□□□ -1.54
SSU72P53538 SUF20tG(GCC)F1 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)F2tG(GCC)F2 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)G1tG(GCC)G1 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)G2tG(GCC)G2 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)J1tG(GCC)J1 71 nt5.43□□□□□ -1.54
SSU72P53538 SUF23tG(GCC)J2 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)MtG(GCC)M 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)O1tG(GCC)O1 71 nt5.43□□□□□ -1.54
SSU72P53538 SUF17tG(GCC)O2 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)P1tG(GCC)P1 71 nt5.43□□□□□ -1.54
SSU72P53538 tG(GCC)P2tG(GCC)P2 71 nt5.43□□□□□ -1.54
SSU72P53538 YJR107WYJR107W 987 nt5.43□□□□□ -1.54
SSU72P53538 PSR2YLR019W 1194 nt5.43□□□□□ -1.54
SSU72P53538 FOB1YDR110W 1701 nt5.43□□□□□ -1.54
SSU72P53538 COX10YPL172C 1389 nt5.42□□□□□ -1.54
SSU72P53538 PPH21YDL134C 1110 nt5.42□□□□□ -1.54
SSU72P53538 ARP1YHR129C 1155 nt5.42□□□□□ -1.54
SSU72P53538 COX15YER141W 1461 nt5.41□□□□□ -1.54
SSU72P53538 MSC3YLR219W 2187 nt5.41□□□□□ -1.54
SSU72P53538 SUF5tG(CCC)O 72 nt5.41□□□□□ -1.54
SSU72P53538 RHO3YIL118W 696 nt5.41□□□□□ -1.54
SSU72P53538 MIA40YKL195W 1212 nt5.41□□□□□ -1.54
SSU72P53538 KSH1YNL024C-A 219 nt5.41□□□□□ -1.54
SSU72P53538 YOL046CYOL046C 675 nt5.41□□□□□ -1.54
SSU72P53538 ENV9YOR246C 993 nt5.41□□□□□ -1.54
SSU72P53538 EDE1YBL047C 4146 nt5.41□□□□□ -1.54
SSU72P53538 HSP104YLL026W 2727 nt5.41□□□□□ -1.54
SSU72P53538 MAK32YCR019W 1092 nt5.4□□□□□ -1.54
SSU72P53538 AGX1YFL030W 1158 nt5.4□□□□□ -1.54
SSU72P53538 YPT1YFL038C 621 nt5.4□□□□□ -1.54
SSU72P53538 DYS1YHR068W 1164 nt5.4□□□□□ -1.54
SSU72P53538 VPS1YKR001C 2115 nt5.4□□□□□ -1.54
SSU72P53538 YML6YML025C 861 nt5.4□□□□□ -1.54
SSU72P53538 AAD14YNL331C 1131 nt5.4□□□□□ -1.54
SSU72P53538 YBR113WYBR113W 483 nt5.4□□□□□ -1.54
SSU72P53538 NSI1YDR026C 1713 nt5.4□□□□□ -1.55
SSU72P53538 COQ1YBR003W 1422 nt5.4□□□□□ -1.55
SSU72P53538 HOS1YPR068C 1413 nt5.4□□□□□ -1.55
SSU72P53538 PYC1YGL062W 3537 nt5.39□□□□□ -1.55
SSU72P53538 PRY3YJL078C 2646 nt5.39□□□□□ -1.55
SSU72P53538 TOS6YNL300W 309 nt5.39□□□□□ -1.55
SSU72P53538 RFC4YOL094C 972 nt5.39□□□□□ -1.55
SSU72P53538 DEF1YKL054C 2217 nt5.39□□□□□ -1.55
SSU72P53538 YHK8YHR048W 1545 nt5.38□□□□□ -1.55
SSU72P53538 VAN1YML115C 1608 nt5.38□□□□□ -1.55
SSU72P53538 YFR052C-AYFR052C-A 306 nt5.38□□□□□ -1.55
SSU72P53538 RNH1YMR234W 1047 nt5.38□□□□□ -1.55
SSU72P53538 ODC2YOR222W 924 nt5.38□□□□□ -1.55
SSU72P53538 CTF19YPL018W 1110 nt5.38□□□□□ -1.55
SSU72P53538 LGE1YPL055C 999 nt5.38□□□□□ -1.55
SSU72P53538 SEC62YPL094C 825 nt5.38□□□□□ -1.55
SSU72P53538 YPL250W-AYPL250W-A 288 nt5.38□□□□□ -1.55
SSU72P53538 TPO3YPR156C 1869 nt5.38□□□□□ -1.55
SSU72P53538 MTC5YDR128W 3447 nt5.37□□□□□ -1.55
SSU72P53538 AIM33YML087C 939 nt5.37□□□□□ -1.55
SSU72P53538 PDR16YNL231C 1056 nt5.37□□□□□ -1.55
SSU72P53538 CTS2YDR371W 1536 nt5.37□□□□□ -1.55
SSU72P53538 HEM1YDR232W 1647 nt5.37□□□□□ -1.55
SSU72P53538 STT3YGL022W 2157 nt5.36□□□□□ -1.55
SSU72P53538 PEX3YDR329C 1326 nt5.36□□□□□ -1.55
SSU72P53538 ABZ1YNR033W 2364 nt5.36□□□□□ -1.55
SSU72P53538 YIR007WYIR007W 2295 nt5.35□□□□□ -1.55
SSU72P53538 SEC18YBR080C 2277 nt5.35□□□□□ -1.55
SSU72P53538 ROG3YFR022W 2202 nt5.35□□□□□ -1.55
SSU72P53538 CLP1YOR250C 1338 nt5.35□□□□□ -1.55
SSU72P53538 RUF23RUF23 254 nt5.35□□□□□ -1.55
SSU72P53538 ZIM17YNL310C 525 nt5.35□□□□□ -1.55
SSU72P53538 MCP1YOR228C 909 nt5.35□□□□□ -1.55
SSU72P53538 MET7YOR241W 1647 nt5.34□□□□□ -1.55
SSU72P53538 SES1YDR023W 1389 nt5.34□□□□□ -1.55
SSU72P53538 YRB2YIL063C 984 nt5.34□□□□□ -1.55
SSU72P53538 LIA1YJR070C 978 nt5.34□□□□□ -1.55
SSU72P53538 HOC1YJR075W 1191 nt5.34□□□□□ -1.55
SSU72P53538 YJR146WYJR146W 354 nt5.34□□□□□ -1.55
SSU72P53538 NRM1YNR009W 750 nt5.34□□□□□ -1.55
SSU72P53538 ATG7YHR171W 1893 nt5.34□□□□□ -1.55
SSU72P53538 DOT1YDR440W 1749 nt5.34□□□□□ -1.56
SSU72P53538 MCM6YGL201C 3054 nt5.34□□□□□ -1.56
SSU72P53538 PMT3YOR321W 2262 nt5.34□□□□□ -1.56
SSU72P53538 GPA2YER020W 1350 nt5.33□□□□□ -1.56
SSU72P53538 OXP1YKL215C 3861 nt5.33□□□□□ -1.56
SSU72P53538 YHR213W-BYHR213W-B 300 nt5.33□□□□□ -1.56
SSU72P53538 FBA1YKL060C 1080 nt5.33□□□□□ -1.56
SSU72P53538 YAR064WYAR064W 300 nt5.33□□□□□ -1.56
SSU72P53538 YPL257WYPL257W 582 nt5.33□□□□□ -1.56
SSU72P53538 SPE3YPR069C 882 nt5.33□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 100.1 ms