Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 GCG1YER163C 699 nt7.86□□□□□ -1.15
MSH4P40965 YIP4YGL198W 708 nt7.86□□□□□ -1.15
MSH4P40965 VAR1Q0140 1197 nt7.86□□□□□ -1.15
MSH4P40965 FMO1YHR176W 1299 nt7.86□□□□□ -1.15
MSH4P40965 ASN2YGR124W 1719 nt7.86□□□□□ -1.15
MSH4P40965 YLL058WYLL058W 1728 nt7.86□□□□□ -1.15
MSH4P40965 EFM1YHL039W 1758 nt7.85□□□□□ -1.15
MSH4P40965 ICP55YER078C 1536 nt7.85□□□□□ -1.15
MSH4P40965 YCR041WYCR041W 333 nt7.85□□□□□ -1.15
MSH4P40965 MRI1YPR118W 1236 nt7.85□□□□□ -1.15
MSH4P40965 YPR127WYPR127W 1038 nt7.85□□□□□ -1.15
MSH4P40965 YOS9YDR057W 1629 nt7.85□□□□□ -1.15
MSH4P40965 PAC10YGR078C 600 nt7.84□□□□□ -1.15
MSH4P40965 REV7YIL139C 738 nt7.84□□□□□ -1.15
MSH4P40965 SED5YLR026C 1023 nt7.84□□□□□ -1.15
MSH4P40965 YLR112WYLR112W 420 nt7.84□□□□□ -1.15
MSH4P40965 HST2YPL015C 1074 nt7.84□□□□□ -1.15
MSH4P40965 PRE2YPR103W 864 nt7.84□□□□□ -1.15
MSH4P40965 MSC3YLR219W 2187 nt7.83□□□□□ -1.16
MSH4P40965 tR(UCU)Q1tR(UCU)Q1 73 nt7.83□□□□□ -1.16
MSH4P40965 LYS12YIL094C 1116 nt7.83□□□□□ -1.16
MSH4P40965 TFC6YDR362C 2019 nt7.83□□□□□ -1.16
MSH4P40965 STD1YOR047C 1335 nt7.82□□□□□ -1.16
MSH4P40965 PTC7YHR076W 1032 nt7.82□□□□□ -1.16
MSH4P40965 UBC12YLR306W 567 nt7.82□□□□□ -1.16
MSH4P40965 YMR252CYMR252C 405 nt7.82□□□□□ -1.16
MSH4P40965 SMX3YPR182W 261 nt7.82□□□□□ -1.16
MSH4P40965 SPS22YCL048W 1392 nt7.82□□□□□ -1.16
MSH4P40965 NEM1YHR004C 1341 nt7.81□□□□□ -1.16
MSH4P40965 MIX17YMR002W 471 nt7.81□□□□□ -1.16
MSH4P40965 DSE3YOR264W 1293 nt7.81□□□□□ -1.16
MSH4P40965 YDR387CYDR387C 1668 nt7.81□□□□□ -1.16
MSH4P40965 CHS5YLR330W 2016 nt7.81□□□□□ -1.16
MSH4P40965 TFG2YGR005C 1203 nt7.8□□□□□ -1.16
MSH4P40965 PRI1YIR008C 1230 nt7.8□□□□□ -1.16
MSH4P40965 YKL102CYKL102C 306 nt7.8□□□□□ -1.16
MSH4P40965 AIM2YAL049C 741 nt7.8□□□□□ -1.16
MSH4P40965 SMK1YPR054W 1167 nt7.8□□□□□ -1.16
MSH4P40965 MSG5YNL053W 1470 nt7.8□□□□□ -1.16
MSH4P40965 NOG2YNR053C 1461 nt7.8□□□□□ -1.16
MSH4P40965 OSW2YLR054C 2175 nt7.8□□□□□ -1.16
MSH4P40965 GPH1YPR160W 2709 nt7.79□□□□□ -1.16
MSH4P40965 YIR017W-AYIR017W-A 600 nt7.79□□□□□ -1.16
MSH4P40965 REC107YJR021C 945 nt7.79□□□□□ -1.16
MSH4P40965 QRI5YLR204W 336 nt7.79□□□□□ -1.16
MSH4P40965 YLR311CYLR311C 348 nt7.79□□□□□ -1.16
MSH4P40965 IRC5YFR038W 2562 nt7.78□□□□□ -1.16
MSH4P40965 TKL2YBR117C 2046 nt7.78□□□□□ -1.16
MSH4P40965 OM45YIL136W 1182 nt7.78□□□□□ -1.16
MSH4P40965 ARC19YKL013C 516 nt7.78□□□□□ -1.16
MSH4P40965 YLR361C-AYLR361C-A 297 nt7.78□□□□□ -1.16
MSH4P40965 PEX12YMR026C 1200 nt7.78□□□□□ -1.16
MSH4P40965 YMR114CYMR114C 1107 nt7.78□□□□□ -1.16
MSH4P40965 SPG5YMR191W 1122 nt7.78□□□□□ -1.16
MSH4P40965 YBR113WYBR113W 483 nt7.78□□□□□ -1.16
MSH4P40965 DLD1YDL174C 1764 nt7.78□□□□□ -1.16
MSH4P40965 COS6YGR295C 1146 nt7.77□□□□□ -1.17
MSH4P40965 TDP1YBR223C 1635 nt7.77□□□□□ -1.17
MSH4P40965 RGT2YDL138W 2292 nt7.76□□□□□ -1.17
MSH4P40965 RRP9YPR137W 1722 nt7.76□□□□□ -1.17
MSH4P40965 FPR2YDR519W 408 nt7.76□□□□□ -1.17
MSH4P40965 GTT3YEL017W 1014 nt7.76□□□□□ -1.17
MSH4P40965 FSF1YOR271C 984 nt7.76□□□□□ -1.17
MSH4P40965 KTR3YBR205W 1215 nt7.76□□□□□ -1.17
MSH4P40965 YEL075W-AYEL075W-A 612 nt7.75□□□□□ -1.17
MSH4P40965 YLR463CYLR463C 552 nt7.75□□□□□ -1.17
MSH4P40965 TIF34YMR146C 1044 nt7.75□□□□□ -1.17
MSH4P40965 RNH1YMR234W 1047 nt7.75□□□□□ -1.17
MSH4P40965 SVF1YDR346C 1446 nt7.75□□□□□ -1.17
MSH4P40965 RAI1YGL246C 1164 nt7.74□□□□□ -1.17
MSH4P40965 COX3Q0275 810 nt7.74□□□□□ -1.17
MSH4P40965 YKL018C-AYKL018C-A 300 nt7.74□□□□□ -1.17
MSH4P40965 RNH201YNL072W 924 nt7.74□□□□□ -1.17
MSH4P40965 ERG8YMR220W 1356 nt7.73□□□□□ -1.17
MSH4P40965 MRPS28YDR337W 861 nt7.73□□□□□ -1.17
MSH4P40965 QCR6YFR033C 444 nt7.73□□□□□ -1.17
MSH4P40965 YHR140WYHR140W 720 nt7.73□□□□□ -1.17
MSH4P40965 TDH2YJR009C 999 nt7.73□□□□□ -1.17
MSH4P40965 YMR122CYMR122C 375 nt7.73□□□□□ -1.17
MSH4P40965 YNL092WYNL092W 1203 nt7.73□□□□□ -1.17
MSH4P40965 OPT1YJL212C 2400 nt7.73□□□□□ -1.17
MSH4P40965 GSH1YJL101C 2037 nt7.73□□□□□ -1.17
MSH4P40965 CMR1YDL156W 1569 nt7.72□□□□□ -1.17
MSH4P40965 HIS1YER055C 894 nt7.72□□□□□ -1.17
MSH4P40965 MPS2YGL075C 1164 nt7.72□□□□□ -1.17
MSH4P40965 RPL31BYLR406C 342 nt7.72□□□□□ -1.17
MSH4P40965 CDC1YDR182W 1476 nt7.71□□□□□ -1.18
MSH4P40965 HED1YDR014W-A 489 nt7.71□□□□□ -1.18
MSH4P40965 NTG1YAL015C 1200 nt7.71□□□□□ -1.18
MSH4P40965 SWD1YAR003W 1281 nt7.71□□□□□ -1.18
MSH4P40965 CUE4YML101C 354 nt7.71□□□□□ -1.18
MSH4P40965 SNT309YPR101W 528 nt7.71□□□□□ -1.18
MSH4P40965 YFL052WYFL052W 1398 nt7.71□□□□□ -1.18
MSH4P40965 HXT2YMR011W 1626 nt7.7□□□□□ -1.18
MSH4P40965 CYB2YML054C 1776 nt7.7□□□□□ -1.18
MSH4P40965 AIR1YIL079C 1083 nt7.7□□□□□ -1.18
MSH4P40965 AME1YBR211C 975 nt7.7□□□□□ -1.18
MSH4P40965 CEM1YER061C 1329 nt7.7□□□□□ -1.18
MSH4P40965 GPA1YHR005C 1419 nt7.69□□□□□ -1.18
MSH4P40965 MCH2YKL221W 1422 nt7.69□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 43.5 ms