Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 IGHGP-201ENST00000390555 1178 ntBASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC28.16■■■□□ 2.1
PPARGC1BQ86YN6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 AL136038.3-201ENST00000561909 1096 ntBASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPARGC1BQ86YN6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PPARGC1BQ86YN6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC28.14■■■□□ 2.09
PPARGC1BQ86YN6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC28.14■■■□□ 2.09
PPARGC1BQ86YN6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC28.14■■■□□ 2.09
PPARGC1BQ86YN6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC28.14■■■□□ 2.09
PPARGC1BQ86YN6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PPARGC1BQ86YN6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PPARGC1BQ86YN6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 AC011498.5-201ENST00000592027 486 ntBASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 AL390719.2-201ENST00000606993 987 ntBASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 AL121956.5-201ENST00000625261 221 ntBASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPARGC1BQ86YN6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms