Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NIPSNAP3BQ9BS92 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NIPSNAP3BQ9BS92 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NIPSNAP3BQ9BS92 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NIPSNAP3BQ9BS92 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NIPSNAP3BQ9BS92 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NIPSNAP3BQ9BS92 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NIPSNAP3BQ9BS92 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.53■□□□□ 0.72
NIPSNAP3BQ9BS92 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NIPSNAP3BQ9BS92 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
NIPSNAP3BQ9BS92 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NIPSNAP3BQ9BS92 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NIPSNAP3BQ9BS92 AC012676.1-201ENST00000574705 1949 ntBASIC19.52■□□□□ 0.72
NIPSNAP3BQ9BS92 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.52■□□□□ 0.72
NIPSNAP3BQ9BS92 AC092803.2-201ENST00000564287 1899 ntBASIC19.52■□□□□ 0.71
NIPSNAP3BQ9BS92 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NIPSNAP3BQ9BS92 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NIPSNAP3BQ9BS92 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NIPSNAP3BQ9BS92 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPSNAP3BQ9BS92 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPSNAP3BQ9BS92 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.5■□□□□ 0.71
NIPSNAP3BQ9BS92 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPSNAP3BQ9BS92 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.5■□□□□ 0.71
NIPSNAP3BQ9BS92 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.5■□□□□ 0.71
NIPSNAP3BQ9BS92 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
NIPSNAP3BQ9BS92 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.5■□□□□ 0.71
NIPSNAP3BQ9BS92 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPSNAP3BQ9BS92 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.49■□□□□ 0.71
NIPSNAP3BQ9BS92 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NIPSNAP3BQ9BS92 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NIPSNAP3BQ9BS92 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NIPSNAP3BQ9BS92 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPSNAP3BQ9BS92 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPSNAP3BQ9BS92 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NIPSNAP3BQ9BS92 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NIPSNAP3BQ9BS92 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.48■□□□□ 0.71
NIPSNAP3BQ9BS92 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NIPSNAP3BQ9BS92 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.48■□□□□ 0.71
NIPSNAP3BQ9BS92 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NIPSNAP3BQ9BS92 ERN1-208ENST00000606895 2068 ntBASIC19.47■□□□□ 0.71
NIPSNAP3BQ9BS92 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.47■□□□□ 0.71
NIPSNAP3BQ9BS92 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
NIPSNAP3BQ9BS92 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPSNAP3BQ9BS92 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.47■□□□□ 0.71
NIPSNAP3BQ9BS92 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPSNAP3BQ9BS92 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPSNAP3BQ9BS92 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.46■□□□□ 0.71
NIPSNAP3BQ9BS92 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.46■□□□□ 0.71
NIPSNAP3BQ9BS92 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.46■□□□□ 0.71
NIPSNAP3BQ9BS92 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.46■□□□□ 0.71
NIPSNAP3BQ9BS92 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3BQ9BS92 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3BQ9BS92 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3BQ9BS92 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NIPSNAP3BQ9BS92 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3BQ9BS92 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3BQ9BS92 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3BQ9BS92 AL391121.1-201ENST00000607967 1349 ntBASIC19.45■□□□□ 0.7
NIPSNAP3BQ9BS92 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3BQ9BS92 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.44■□□□□ 0.7
NIPSNAP3BQ9BS92 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3BQ9BS92 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3BQ9BS92 CAHM-201ENST00000604200 896 ntBASIC19.44■□□□□ 0.7
NIPSNAP3BQ9BS92 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3BQ9BS92 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NIPSNAP3BQ9BS92 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3BQ9BS92 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3BQ9BS92 SUZ12P1-203ENST00000578195 985 ntBASIC19.43■□□□□ 0.7
NIPSNAP3BQ9BS92 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3BQ9BS92 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3BQ9BS92 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
NIPSNAP3BQ9BS92 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.42■□□□□ 0.7
NIPSNAP3BQ9BS92 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3BQ9BS92 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3BQ9BS92 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3BQ9BS92 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.42■□□□□ 0.7
NIPSNAP3BQ9BS92 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3BQ9BS92 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NIPSNAP3BQ9BS92 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3BQ9BS92 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3BQ9BS92 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NIPSNAP3BQ9BS92 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3BQ9BS92 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3BQ9BS92 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3BQ9BS92 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms