Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm43566-201ENSMUST00000196851 808 ntBASIC23.73■■□□□ 1.39
PrnpP04925 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
PrnpP04925 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PrnpP04925 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PrnpP04925 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PrnpP04925 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PrnpP04925 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PrnpP04925 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PrnpP04925 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PrnpP04925 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PrnpP04925 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PrnpP04925 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PrnpP04925 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.71■■□□□ 1.39
PrnpP04925 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.71■■□□□ 1.39
PrnpP04925 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PrnpP04925 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PrnpP04925 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PrnpP04925 Gm45444-201ENSMUST00000211394 898 ntBASIC23.7■■□□□ 1.38
PrnpP04925 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PrnpP04925 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PrnpP04925 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PrnpP04925 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PrnpP04925 Gm13238-201ENSMUST00000117655 780 ntBASIC23.69■■□□□ 1.38
PrnpP04925 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PrnpP04925 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.68■■□□□ 1.38
PrnpP04925 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.68■■□□□ 1.38
PrnpP04925 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PrnpP04925 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PrnpP04925 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PrnpP04925 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PrnpP04925 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PrnpP04925 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PrnpP04925 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PrnpP04925 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PrnpP04925 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PrnpP04925 Gm15820-201ENSMUST00000201566 728 ntBASIC23.65■■□□□ 1.38
PrnpP04925 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PrnpP04925 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PrnpP04925 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PrnpP04925 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.63■■□□□ 1.37
PrnpP04925 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.63■■□□□ 1.37
PrnpP04925 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.63■■□□□ 1.37
PrnpP04925 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PrnpP04925 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PrnpP04925 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PrnpP04925 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.62■■□□□ 1.37
PrnpP04925 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.62■■□□□ 1.37
PrnpP04925 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PrnpP04925 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PrnpP04925 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PrnpP04925 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PrnpP04925 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PrnpP04925 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.6■■□□□ 1.37
PrnpP04925 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.6■■□□□ 1.37
PrnpP04925 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.6■■□□□ 1.37
PrnpP04925 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.6■■□□□ 1.37
PrnpP04925 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PrnpP04925 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PrnpP04925 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PrnpP04925 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.59■■□□□ 1.37
PrnpP04925 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PrnpP04925 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.59■■□□□ 1.37
PrnpP04925 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PrnpP04925 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PrnpP04925 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
PrnpP04925 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PrnpP04925 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PrnpP04925 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PrnpP04925 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PrnpP04925 Rps24-207ENSMUST00000224568 714 ntBASIC23.58■■□□□ 1.37
PrnpP04925 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
PrnpP04925 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PrnpP04925 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.58■■□□□ 1.37
PrnpP04925 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
PrnpP04925 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PrnpP04925 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PrnpP04925 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.57■■□□□ 1.36
PrnpP04925 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.56■■□□□ 1.36
PrnpP04925 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PrnpP04925 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PrnpP04925 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PrnpP04925 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PrnpP04925 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PrnpP04925 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PrnpP04925 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PrnpP04925 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PrnpP04925 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PrnpP04925 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PrnpP04925 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PrnpP04925 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.54■■□□□ 1.36
PrnpP04925 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PrnpP04925 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PrnpP04925 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PrnpP04925 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PrnpP04925 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PrnpP04925 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PrnpP04925 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PrnpP04925 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
PrnpP04925 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PrnpP04925 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms