Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 SLC25A3P1-201ENST00000443844 931 ntBASIC17.75■□□□□ 0.43
KRT78Q8N1N4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 MIR3180-4-201ENST00000582223 153 ntBASIC17.75■□□□□ 0.43
KRT78Q8N1N4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 AL163051.1-201ENST00000569214 1512 ntBASIC17.75■□□□□ 0.43
KRT78Q8N1N4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT78Q8N1N4 AL162741.1-201ENST00000565563 1558 ntBASIC17.74■□□□□ 0.43
KRT78Q8N1N4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 MIR149-201ENST00000384879 89 ntBASIC17.74■□□□□ 0.43
KRT78Q8N1N4 ECEL1P3-201ENST00000427961 737 ntBASIC17.74■□□□□ 0.43
KRT78Q8N1N4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.74■□□□□ 0.43
KRT78Q8N1N4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 AC009102.3-201ENST00000623118 1491 ntBASIC17.74■□□□□ 0.43
KRT78Q8N1N4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT78Q8N1N4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KRT78Q8N1N4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms