Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
THSD1Q9NS62 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
THSD1Q9NS62 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.89■□□□□ 0.46
THSD1Q9NS62 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
THSD1Q9NS62 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
THSD1Q9NS62 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
THSD1Q9NS62 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.89■□□□□ 0.46
THSD1Q9NS62 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THSD1Q9NS62 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
THSD1Q9NS62 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 AC091304.2-201ENST00000564639 760 ntBASIC17.88■□□□□ 0.45
THSD1Q9NS62 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 Z98044.1-201ENST00000632503 1764 ntBASIC17.88■□□□□ 0.45
THSD1Q9NS62 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THSD1Q9NS62 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.88■□□□□ 0.45
THSD1Q9NS62 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 AC036111.1-201ENST00000533973 1582 ntBASIC17.87■□□□□ 0.45
THSD1Q9NS62 GPAT2P1-201ENST00000444924 1672 ntBASIC17.87■□□□□ 0.45
THSD1Q9NS62 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 AC104417.2-201ENST00000562989 1793 ntBASIC17.87■□□□□ 0.45
THSD1Q9NS62 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 TSPY19P-201ENST00000418461 509 ntBASIC17.87■□□□□ 0.45
THSD1Q9NS62 TSPY18P-201ENST00000441642 509 ntBASIC17.87■□□□□ 0.45
THSD1Q9NS62 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.87■□□□□ 0.45
THSD1Q9NS62 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THSD1Q9NS62 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms