Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 AP000523.1-201ENST00000398242 1049 ntBASIC17.78■□□□□ 0.44
KRT78Q8N1N4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 AC133561.5-201ENST00000635547 218 ntBASIC17.78■□□□□ 0.44
KRT78Q8N1N4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KRT78Q8N1N4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 AC009947.2-201ENST00000444014 672 ntBASIC17.77■□□□□ 0.44
KRT78Q8N1N4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT78Q8N1N4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT78Q8N1N4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
KRT78Q8N1N4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT78Q8N1N4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
KRT78Q8N1N4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
KRT78Q8N1N4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT78Q8N1N4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
KRT78Q8N1N4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT78Q8N1N4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 LIN28AP1-201ENST00000429574 405 ntBASIC17.76■□□□□ 0.43
KRT78Q8N1N4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 AC104390.1-201ENST00000555663 520 ntBASIC17.76■□□□□ 0.43
KRT78Q8N1N4 NEK4P2-201ENST00000580004 1012 ntBASIC17.76■□□□□ 0.43
KRT78Q8N1N4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT78Q8N1N4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.76■□□□□ 0.43
KRT78Q8N1N4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms