Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.19□□□□□ -1.421e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC5.96□□□□□ -1.461e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.83□□□□□ -1.481e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.52□□□□□ -1.531e-7■□□□□ 10.7
SRSF1Q07955 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.52□□□□□ -1.531e-7■□□□□ 10.7
SRSF1Q07955 TANGO2-208ENST00000430807 733 ntTSL 321.56■■□□□ 1.042e-7■□□□□ 10.7
SRSF1Q07955 TANGO2-206ENST00000411907 568 ntTSL 420.56■□□□□ 0.882e-7■□□□□ 10.7
SRSF1Q07955 TANGO2-211ENST00000434168 862 ntTSL 318.38■□□□□ 0.532e-7■□□□□ 10.7
SRSF1Q07955 TANGO2-216ENST00000450664 570 ntTSL 418.06■□□□□ 0.482e-7■□□□□ 10.7
SRSF1Q07955 TANGO2-218ENST00000462579 649 ntTSL 416.11■□□□□ 0.172e-7■□□□□ 10.7
SRSF1Q07955 CCDC57-213ENST00000581625 491 ntTSL 514.23□□□□□ -0.131e-6■□□□□ 10.7
SRSF1Q07955 CCDC57-212ENST00000578910 796 ntTSL 513.88□□□□□ -0.191e-6■□□□□ 10.7
SRSF1Q07955 TANGO2-224ENST00000485715 617 ntTSL 513.01□□□□□ -0.332e-7■□□□□ 10.7
SRSF1Q07955 CCDC57-211ENST00000578187 696 ntTSL 212.17□□□□□ -0.461e-6■□□□□ 10.7
SRSF1Q07955 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.71e-6■□□□□ 10.7
SRSF1Q07955 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.731e-6■□□□□ 10.7
SRSF1Q07955 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.731e-6■□□□□ 10.7
SRSF1Q07955 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.99□□□□□ -0.175e-7■□□□□ 10.7
SRSF1Q07955 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.193e-6■□□□□ 10.7
SRSF1Q07955 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.871e-8■□□□□ 10.7
SRSF1Q07955 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.011e-8■□□□□ 10.7
SRSF1Q07955 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.021e-8■□□□□ 10.7
SRSF1Q07955 SMARCD1-204ENST00000547637 587 ntTSL 222.64■■□□□ 1.217e-6■□□□□ 10.7
SRSF1Q07955 SMARCD1-209ENST00000550477 911 ntTSL 322.64■■□□□ 1.217e-6■□□□□ 10.7
SRSF1Q07955 NLGN2-203ENST00000572893 305 ntTSL 322.23■■□□□ 1.157e-6■□□□□ 10.7
SRSF1Q07955 SMARCD1-212ENST00000551966 881 ntTSL 521.86■■□□□ 1.097e-6■□□□□ 10.7
SRSF1Q07955 MAP4K5-204ENST00000554273 484 ntTSL 321.61■■□□□ 1.057e-6■□□□□ 10.7
SRSF1Q07955 SMARCD1-203ENST00000547247 1584 ntTSL 1 (best)20.68■□□□□ 0.97e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-219ENST00000636942 1696 ntTSL 518.83■□□□□ 0.617e-6■□□□□ 10.7
SRSF1Q07955 RPUSD4-206ENST00000532674 582 ntTSL 518.81■□□□□ 0.67e-6■□□□□ 10.7
SRSF1Q07955 APRT-203ENST00000562464 515 ntTSL 318.61■□□□□ 0.577e-6■□□□□ 10.7
SRSF1Q07955 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.57e-6■□□□□ 10.7
SRSF1Q07955 ROCK2-201ENST00000261535 1795 ntTSL 518.06■□□□□ 0.487e-6■□□□□ 10.7
SRSF1Q07955 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.96■□□□□ 0.467e-6■□□□□ 10.7
SRSF1Q07955 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.66■□□□□ 0.427e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-215ENST00000636646 2151 ntTSL 517.38■□□□□ 0.377e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-201ENST00000463721 1836 ntTSL 217.25■□□□□ 0.357e-6■□□□□ 10.7
SRSF1Q07955 SLC2A4RG-208ENST00000496425 502 ntTSL 217.16■□□□□ 0.346e-8■□□□□ 10.7
SRSF1Q07955 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.1■□□□□ 0.337e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-212ENST00000636089 2230 ntTSL 516.96■□□□□ 0.37e-6■□□□□ 10.7
SRSF1Q07955 MAP4K5-209ENST00000557390 545 ntTSL 316.89■□□□□ 0.297e-6■□□□□ 10.7
SRSF1Q07955 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.277e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.267e-6■□□□□ 10.7
SRSF1Q07955 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.237e-6■□□□□ 10.7
SRSF1Q07955 TNFRSF19-205ENST00000464735 660 ntTSL 216.23■□□□□ 0.197e-6■□□□□ 10.7
SRSF1Q07955 DHX38-205ENST00000564307 785 ntTSL 416.21■□□□□ 0.192e-6■□□□□ 10.7
SRSF1Q07955 ACY1-221ENST00000637199 790 ntTSL 216.1■□□□□ 0.177e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-226ENST00000637696 2373 ntTSL 516.05■□□□□ 0.167e-6■□□□□ 10.7
SRSF1Q07955 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.94■□□□□ 0.142e-8■□□□□ 10.7
SRSF1Q07955 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.147e-6■□□□□ 10.7
SRSF1Q07955 APRT-211ENST00000569616 788 ntTSL 515.83■□□□□ 0.127e-6■□□□□ 10.7
SRSF1Q07955 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.72■□□□□ 0.117e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-208ENST00000635951 2168 ntTSL 515.6■□□□□ 0.097e-6■□□□□ 10.7
SRSF1Q07955 ACY1-209ENST00000491318 1390 ntTSL 315.25■□□□□ 0.037e-6■□□□□ 10.7
SRSF1Q07955 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.23■□□□□ 0.037e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-229ENST00000637978 1758 ntAPPRIS P5 TSL 515.15■□□□□ 0.027e-6■□□□□ 10.7
SRSF1Q07955 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.017e-6■□□□□ 10.7
SRSF1Q07955 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.07■□□□□ 07e-6■□□□□ 10.7
SRSF1Q07955 ACY1-226ENST00000637746 685 ntTSL 214.82□□□□□ -0.047e-6■□□□□ 10.7
SRSF1Q07955 ACY1-218ENST00000637034 745 ntTSL 314.82□□□□□ -0.047e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-217ENST00000636718 2499 ntTSL 514.77□□□□□ -0.057e-6■□□□□ 10.7
SRSF1Q07955 GALT-218ENST00000554944 969 ntTSL 214.73□□□□□ -0.057e-6■□□□□ 10.7
SRSF1Q07955 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.067e-6■□□□□ 10.7
SRSF1Q07955 ACY1-217ENST00000636880 1457 ntTSL 314.64□□□□□ -0.077e-6■□□□□ 10.7
SRSF1Q07955 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.53□□□□□ -0.087e-6■□□□□ 10.7
SRSF1Q07955 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.47□□□□□ -0.097e-6■□□□□ 10.7
SRSF1Q07955 GALT-220ENST00000555086 1060 ntTSL 214.42□□□□□ -0.17e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-207ENST00000635946 2459 ntTSL 514.37□□□□□ -0.117e-6■□□□□ 10.7
SRSF1Q07955 MCM3-206ENST00000596983 559 ntTSL 314.2□□□□□ -0.142e-8■□□□□ 10.7
SRSF1Q07955 ACY1-229ENST00000638136 1857 ntTSL 514.08□□□□□ -0.167e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-225ENST00000637563 2622 ntTSL 514.07□□□□□ -0.167e-6■□□□□ 10.7
SRSF1Q07955 ZNF445-203ENST00000460529 1312 ntTSL 1 (best)14.03□□□□□ -0.167e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-206ENST00000427810 560 ntTSL 413.98□□□□□ -0.172e-8■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-224ENST00000637512 1536 ntTSL 513.93□□□□□ -0.187e-6■□□□□ 10.7
SRSF1Q07955 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.27e-6■□□□□ 10.7
SRSF1Q07955 APRT-207ENST00000567391 667 ntTSL 313.78□□□□□ -0.27e-6■□□□□ 10.7
SRSF1Q07955 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.76□□□□□ -0.217e-6■□□□□ 10.7
SRSF1Q07955 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.73□□□□□ -0.217e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-228ENST00000534569 682 ntTSL 313.71□□□□□ -0.212e-8■□□□□ 10.7
SRSF1Q07955 RFWD3-204ENST00000572337 586 ntTSL 413.53□□□□□ -0.242e-8■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-220ENST00000637025 2926 ntTSL 513.43□□□□□ -0.267e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-216ENST00000636660 1126 ntTSL 513.39□□□□□ -0.277e-6■□□□□ 10.7
SRSF1Q07955 ACAA1-215ENST00000469600 876 ntTSL 213.31□□□□□ -0.282e-8■□□□□ 10.7
SRSF1Q07955 ACY1-213ENST00000635941 1691 ntTSL 513.14□□□□□ -0.317e-6■□□□□ 10.7
SRSF1Q07955 ACY1-219ENST00000637102 1488 ntTSL 313.11□□□□□ -0.317e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-218ENST00000636826 2940 ntTSL 513.08□□□□□ -0.327e-6■□□□□ 10.7
SRSF1Q07955 GALT-215ENST00000554550 1164 ntTSL 212.99□□□□□ -0.337e-6■□□□□ 10.7
SRSF1Q07955 GALT-224ENST00000556244 807 ntTSL 312.99□□□□□ -0.337e-6■□□□□ 10.7
SRSF1Q07955 GALT-206ENST00000473506 838 ntTSL 512.99□□□□□ -0.337e-6■□□□□ 10.7
SRSF1Q07955 GALT-212ENST00000554085 890 ntTSL 512.99□□□□□ -0.337e-6■□□□□ 10.7
SRSF1Q07955 APRT-210ENST00000568575 490 ntTSL 212.93□□□□□ -0.347e-6■□□□□ 10.7
SRSF1Q07955 HNRNPH3-206ENST00000478698 1507 ntTSL 212.93□□□□□ -0.344e-8■□□□□ 10.7
SRSF1Q07955 HNRNPH3-210ENST00000490442 1521 ntTSL 212.93□□□□□ -0.342e-8■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-206ENST00000635937 3078 ntTSL 512.74□□□□□ -0.377e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-221ENST00000637130 3158 ntTSL 512.44□□□□□ -0.427e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-205ENST00000635785 1060 ntTSL 512.44□□□□□ -0.427e-6■□□□□ 10.7
SRSF1Q07955 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.447e-6■□□□□ 10.7
SRSF1Q07955 GALT-221ENST00000555214 689 ntTSL 312.3□□□□□ -0.447e-6■□□□□ 10.7
SRSF1Q07955 GALT-222ENST00000555754 727 ntTSL 312.2□□□□□ -0.467e-6■□□□□ 10.7
SRSF1Q07955 APRT-209ENST00000568319 542 ntTSL 312.19□□□□□ -0.467e-6■□□□□ 10.7
Retrieved 100 of 14,836 protein–RNA pairs in 377.5 ms