Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 ECM10YEL030W 1935 nt7.41□□□□□ -1.22
YNL040WP53960 HHY1YEL059W 309 nt7.41□□□□□ -1.22
YNL040WP53960 SUF3tG(CCC)D 72 nt7.4□□□□□ -1.22
YNL040WP53960 PET117YER058W 324 nt7.4□□□□□ -1.22
YNL040WP53960 YMR074CYMR074C 438 nt7.4□□□□□ -1.22
YNL040WP53960 HXT13YEL069C 1695 nt7.4□□□□□ -1.23
YNL040WP53960 CDC7YDL017W 1524 nt7.39□□□□□ -1.23
YNL040WP53960 YCR041WYCR041W 333 nt7.39□□□□□ -1.23
YNL040WP53960 YAL019W-AYAL019W-A 570 nt7.39□□□□□ -1.23
YNL040WP53960 MBF1YOR298C-A 456 nt7.39□□□□□ -1.23
YNL040WP53960 NFS1YCL017C 1494 nt7.38□□□□□ -1.23
YNL040WP53960 YPQ2YDR352W 954 nt7.38□□□□□ -1.23
YNL040WP53960 CYS3YAL012W 1185 nt7.38□□□□□ -1.23
YNL040WP53960 RTC4YNL254C 1206 nt7.38□□□□□ -1.23
YNL040WP53960 YOR389WYOR389W 1875 nt7.37□□□□□ -1.23
YNL040WP53960 TRR2YHR106W 1029 nt7.37□□□□□ -1.23
YNL040WP53960 AIM2YAL049C 741 nt7.37□□□□□ -1.23
YNL040WP53960 CDC13YDL220C 2775 nt7.37□□□□□ -1.23
YNL040WP53960 SEC23YPR181C 2307 nt7.36□□□□□ -1.23
YNL040WP53960 MAS1YLR163C 1389 nt7.36□□□□□ -1.23
YNL040WP53960 PGI1YBR196C 1665 nt7.36□□□□□ -1.23
YNL040WP53960 DPM1YPR183W 804 nt7.36□□□□□ -1.23
YNL040WP53960 EFM1YHL039W 1758 nt7.36□□□□□ -1.23
YNL040WP53960 DMC1YER179W 1005 nt7.35□□□□□ -1.23
YNL040WP53960 PAC10YGR078C 600 nt7.35□□□□□ -1.23
YNL040WP53960 ERG27YLR100W 1044 nt7.35□□□□□ -1.23
YNL040WP53960 YLR112WYLR112W 420 nt7.35□□□□□ -1.23
YNL040WP53960 CST26YBR042C 1194 nt7.35□□□□□ -1.23
YNL040WP53960 DML1YMR211W 1428 nt7.35□□□□□ -1.23
YNL040WP53960 KIN1YDR122W 3195 nt7.34□□□□□ -1.23
YNL040WP53960 PRS4YBL068W 981 nt7.34□□□□□ -1.23
YNL040WP53960 PDA1YER178W 1263 nt7.33□□□□□ -1.24
YNL040WP53960 LAT1YNL071W 1449 nt7.33□□□□□ -1.24
YNL040WP53960 TUB1YML085C 1344 nt7.32□□□□□ -1.24
YNL040WP53960 NAF1YNL124W 1479 nt7.31□□□□□ -1.24
YNL040WP53960 MSB3YNL293W 1902 nt7.31□□□□□ -1.24
YNL040WP53960 RQC1YDR333C 2172 nt7.31□□□□□ -1.24
YNL040WP53960 RPL43AYPR043W 279 nt7.31□□□□□ -1.24
YNL040WP53960 YPR130CYPR130C 408 nt7.31□□□□□ -1.24
YNL040WP53960 snR30snR30 606 nt7.31□□□□□ -1.24
YNL040WP53960 MPE1YKL059C 1326 nt7.3□□□□□ -1.24
YNL040WP53960 YOX1YML027W 1158 nt7.3□□□□□ -1.24
YNL040WP53960 SSC1YJR045C 1965 nt7.29□□□□□ -1.24
YNL040WP53960 SUN4YNL066W 1263 nt7.28□□□□□ -1.24
YNL040WP53960 COS10YNR075W 1125 nt7.28□□□□□ -1.24
YNL040WP53960 GET4YOR164C 939 nt7.28□□□□□ -1.24
YNL040WP53960 PHO85YPL031C 918 nt7.28□□□□□ -1.24
YNL040WP53960 PLB2YMR006C 2121 nt7.28□□□□□ -1.24
YNL040WP53960 MHP1YJL042W 4197 nt7.28□□□□□ -1.24
YNL040WP53960 CCR4YAL021C 2514 nt7.28□□□□□ -1.24
YNL040WP53960 YCL049CYCL049C 939 nt7.26□□□□□ -1.25
YNL040WP53960 NTG1YAL015C 1200 nt7.25□□□□□ -1.25
YNL040WP53960 GPH1YPR160W 2709 nt7.24□□□□□ -1.25
YNL040WP53960 CYB2YML054C 1776 nt7.24□□□□□ -1.25
YNL040WP53960 YCR049CYCR049C 447 nt7.24□□□□□ -1.25
YNL040WP53960 ERS1YCR075C 783 nt7.24□□□□□ -1.25
YNL040WP53960 CIA1YDR267C 993 nt7.24□□□□□ -1.25
YNL040WP53960 AIM46YHR199C 933 nt7.24□□□□□ -1.25
YNL040WP53960 YLR162WYLR162W 357 nt7.24□□□□□ -1.25
YNL040WP53960 ARC35YNR035C 1029 nt7.24□□□□□ -1.25
YNL040WP53960 SNT309YPR101W 528 nt7.24□□□□□ -1.25
YNL040WP53960 CEM1YER061C 1329 nt7.24□□□□□ -1.25
YNL040WP53960 BRN1YBL097W 2265 nt7.24□□□□□ -1.25
YNL040WP53960 THR1YHR025W 1074 nt7.23□□□□□ -1.25
YNL040WP53960 ZIM17YNL310C 525 nt7.23□□□□□ -1.25
YNL040WP53960 YPR127WYPR127W 1038 nt7.23□□□□□ -1.25
YNL040WP53960 GSH1YJL101C 2037 nt7.23□□□□□ -1.25
YNL040WP53960 GNP1YDR508C 1992 nt7.22□□□□□ -1.25
YNL040WP53960 CTA1YDR256C 1548 nt7.22□□□□□ -1.25
YNL040WP53960 ADE2YOR128C 1716 nt7.22□□□□□ -1.25
YNL040WP53960 TRR1YDR353W 960 nt7.22□□□□□ -1.25
YNL040WP53960 MTR3YGR158C 753 nt7.22□□□□□ -1.25
YNL040WP53960 IRC5YFR038W 2562 nt7.22□□□□□ -1.25
YNL040WP53960 MCH2YKL221W 1422 nt7.21□□□□□ -1.25
YNL040WP53960 HTZ1YOL012C 405 nt7.21□□□□□ -1.26
YNL040WP53960 YLL066CYLL066C 3618 nt7.21□□□□□ -1.26
YNL040WP53960 MAM3YOL060C 2121 nt7.21□□□□□ -1.26
YNL040WP53960 HPT1YDR399W 666 nt7.2□□□□□ -1.26
YNL040WP53960 YAL045CYAL045C 309 nt7.2□□□□□ -1.26
YNL040WP53960 AMN1YBR158W 1650 nt7.19□□□□□ -1.26
YNL040WP53960 SML1YML058W 315 nt7.19□□□□□ -1.26
YNL040WP53960 YNR005CYNR005C 405 nt7.19□□□□□ -1.26
YNL040WP53960 MCP1YOR228C 909 nt7.19□□□□□ -1.26
YNL040WP53960 CCT3YJL014W 1605 nt7.19□□□□□ -1.26
YNL040WP53960 TDP1YBR223C 1635 nt7.19□□□□□ -1.26
YNL040WP53960 ICL2YPR006C 1728 nt7.18□□□□□ -1.26
YNL040WP53960 APE4YHR113W 1473 nt7.18□□□□□ -1.26
YNL040WP53960 RPL2BYIL018W 765 nt7.18□□□□□ -1.26
YNL040WP53960 MEU1YLR017W 1014 nt7.18□□□□□ -1.26
YNL040WP53960 YBR241CYBR241C 1467 nt7.17□□□□□ -1.26
YNL040WP53960 URA1YKL216W 945 nt7.17□□□□□ -1.26
YNL040WP53960 NTG2YOL043C 1143 nt7.17□□□□□ -1.26
YNL040WP53960 SMK1YPR054W 1167 nt7.17□□□□□ -1.26
YNL040WP53960 DLD1YDL174C 1764 nt7.17□□□□□ -1.26
YNL040WP53960 MRPL28YDR462W 444 nt7.16□□□□□ -1.26
YNL040WP53960 RRN10YBL025W 438 nt7.16□□□□□ -1.26
YNL040WP53960 MIX17YMR002W 471 nt7.16□□□□□ -1.26
YNL040WP53960 YOL099CYOL099C 492 nt7.16□□□□□ -1.26
YNL040WP53960 MSG5YNL053W 1470 nt7.16□□□□□ -1.26
YNL040WP53960 EDC3YEL015W 1656 nt7.16□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 34.9 ms