Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
GRIN3BO60391 AC239859.2-201ENST00000444165 318 ntBASIC31.32■■■□□ 2.6
GRIN3BO60391 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
GRIN3BO60391 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
GRIN3BO60391 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
GRIN3BO60391 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
GRIN3BO60391 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
GRIN3BO60391 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
GRIN3BO60391 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
GRIN3BO60391 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
GRIN3BO60391 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
GRIN3BO60391 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
GRIN3BO60391 AC120057.4-201ENST00000624722 1615 ntBASIC31.29■■■□□ 2.6
GRIN3BO60391 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.29■■■□□ 2.6
GRIN3BO60391 RAP2CP1-202ENST00000605179 643 ntBASIC31.29■■■□□ 2.6
GRIN3BO60391 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
GRIN3BO60391 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
GRIN3BO60391 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
GRIN3BO60391 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.28■■■□□ 2.6
GRIN3BO60391 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.28■■■□□ 2.6
GRIN3BO60391 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.27■■■□□ 2.6
GRIN3BO60391 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
GRIN3BO60391 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
GRIN3BO60391 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.27■■■□□ 2.6
GRIN3BO60391 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
GRIN3BO60391 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.27■■■□□ 2.6
GRIN3BO60391 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.26■■■□□ 2.59
GRIN3BO60391 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.26■■■□□ 2.59
GRIN3BO60391 AC093536.1-201ENST00000569153 554 ntBASIC31.25■■■□□ 2.59
GRIN3BO60391 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
GRIN3BO60391 AC018755.3-202ENST00000596210 929 ntBASIC31.24■■■□□ 2.59
GRIN3BO60391 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.24■■■□□ 2.59
GRIN3BO60391 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
GRIN3BO60391 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.22■■■□□ 2.59
GRIN3BO60391 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.22■■■□□ 2.59
GRIN3BO60391 Z92544.1-202ENST00000571933 1220 ntBASIC31.22■■■□□ 2.59
GRIN3BO60391 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
GRIN3BO60391 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
GRIN3BO60391 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.21■■■□□ 2.59
GRIN3BO60391 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.21■■■□□ 2.59
GRIN3BO60391 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.21■■■□□ 2.59
GRIN3BO60391 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.21■■■□□ 2.59
GRIN3BO60391 AL161658.1-201ENST00000623641 1967 ntBASIC31.2■■■□□ 2.59
GRIN3BO60391 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
GRIN3BO60391 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.2■■■□□ 2.59
GRIN3BO60391 AL139246.5-201ENST00000606645 996 ntBASIC31.2■■■□□ 2.59
GRIN3BO60391 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
GRIN3BO60391 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
GRIN3BO60391 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
GRIN3BO60391 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
GRIN3BO60391 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.18■■■□□ 2.58
GRIN3BO60391 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.18■■■□□ 2.58
GRIN3BO60391 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.18■■■□□ 2.58
GRIN3BO60391 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
GRIN3BO60391 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
GRIN3BO60391 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
GRIN3BO60391 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
GRIN3BO60391 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.17■■■□□ 2.58
GRIN3BO60391 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
GRIN3BO60391 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.17■■■□□ 2.58
GRIN3BO60391 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
GRIN3BO60391 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.17■■■□□ 2.58
GRIN3BO60391 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
GRIN3BO60391 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.16■■■□□ 2.58
GRIN3BO60391 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.16■■■□□ 2.58
GRIN3BO60391 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.16■■■□□ 2.58
GRIN3BO60391 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
GRIN3BO60391 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
GRIN3BO60391 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.15■■■□□ 2.58
GRIN3BO60391 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
GRIN3BO60391 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.12■■■□□ 2.57
GRIN3BO60391 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
GRIN3BO60391 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
GRIN3BO60391 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
GRIN3BO60391 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
GRIN3BO60391 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
GRIN3BO60391 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
GRIN3BO60391 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
GRIN3BO60391 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.1■■■□□ 2.57
GRIN3BO60391 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
GRIN3BO60391 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
GRIN3BO60391 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.09■■■□□ 2.57
GRIN3BO60391 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
GRIN3BO60391 AC092666.2-201ENST00000613287 246 ntBASIC31.09■■■□□ 2.57
GRIN3BO60391 AL359258.2-201ENST00000564063 1566 ntBASIC31.09■■■□□ 2.57
GRIN3BO60391 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
GRIN3BO60391 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.08■■■□□ 2.57
GRIN3BO60391 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.08■■■□□ 2.57
GRIN3BO60391 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.07■■■□□ 2.56
GRIN3BO60391 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.07■■■□□ 2.56
GRIN3BO60391 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
GRIN3BO60391 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.06■■■□□ 2.56
GRIN3BO60391 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
GRIN3BO60391 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.06■■■□□ 2.56
GRIN3BO60391 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.06■■■□□ 2.56
GRIN3BO60391 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
GRIN3BO60391 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.05■■■□□ 2.56
GRIN3BO60391 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
GRIN3BO60391 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
GRIN3BO60391 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms