Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 VENTXP7-201ENST00000475503 772 ntBASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 AC091607.1-201ENST00000490318 1060 ntBASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 AL160237.2-201ENST00000556165 472 ntBASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 AC004263.2-201ENST00000617183 678 ntBASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SH3TC1Q8TE82 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 NSUN5P1-202ENST00000421140 1535 ntBASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 NSUN5P2-203ENST00000457352 1529 ntBASIC22.98■■□□□ 1.27
SH3TC1Q8TE82 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 MIR149-201ENST00000384879 89 ntBASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SH3TC1Q8TE82 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 CDV3-207ENST00000508481 661 ntTSL 3 BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 AL353801.3-201ENST00000609898 542 ntBASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SH3TC1Q8TE82 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.95■■□□□ 1.27
SH3TC1Q8TE82 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
SH3TC1Q8TE82 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.94■■□□□ 1.26
SH3TC1Q8TE82 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SH3TC1Q8TE82 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SH3TC1Q8TE82 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.94■■□□□ 1.26
SH3TC1Q8TE82 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
SH3TC1Q8TE82 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms