Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 EGLN1P1-201ENST00000531623 762 ntBASIC17.97■□□□□ 0.47
KRT78Q8N1N4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 AC112777.1-201ENST00000540175 1423 ntBASIC17.97■□□□□ 0.47
KRT78Q8N1N4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT78Q8N1N4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 TSPY15P-201ENST00000457163 923 ntBASIC17.96■□□□□ 0.47
KRT78Q8N1N4 AP003041.3-201ENST00000527151 707 ntBASIC17.96■□□□□ 0.47
KRT78Q8N1N4 MIR3180-5-201ENST00000583743 153 ntBASIC17.96■□□□□ 0.47
KRT78Q8N1N4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 AC092338.2-201ENST00000568827 1415 ntBASIC17.96■□□□□ 0.47
KRT78Q8N1N4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 WIZP1-201ENST00000531444 2299 ntBASIC17.96■□□□□ 0.47
KRT78Q8N1N4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.96■□□□□ 0.47
KRT78Q8N1N4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
KRT78Q8N1N4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.96■□□□□ 0.46
KRT78Q8N1N4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
KRT78Q8N1N4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 AC010653.2-201ENST00000623505 997 ntBASIC17.95■□□□□ 0.46
KRT78Q8N1N4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT78Q8N1N4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 MIR564-202ENST00000385049 94 ntBASIC17.94■□□□□ 0.46
KRT78Q8N1N4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT78Q8N1N4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms