Protein–RNA interactions for Protein: Q9UKI3

VPREB3, Pre-B lymphocyte protein 3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3Q9UKI3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.81□□□□□ -0.04
VPREB3Q9UKI3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.81□□□□□ -0.04
VPREB3Q9UKI3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPREB3Q9UKI3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VPREB3Q9UKI3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPREB3Q9UKI3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VPREB3Q9UKI3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 PVRIG2P-201ENST00000435460 978 ntBASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 KRT8P26-201ENST00000534154 1276 ntBASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 AC092119.3-201ENST00000612618 583 ntBASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 HEIH-201ENST00000623091 1652 ntBASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPREB3Q9UKI3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 DUSP5P1-201ENST00000441325 1139 ntBASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 AC092329.2-201ENST00000598402 547 ntBASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 Z98044.1-201ENST00000632503 1764 ntBASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.79□□□□□ -0.04
VPREB3Q9UKI3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 AC007952.6-201ENST00000573168 2673 ntBASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 AC003957.1-201ENST00000625108 2673 ntBASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPREB3Q9UKI3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms