Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 KRT8P9-201ENST00000558927 1449 ntBASIC16.4■□□□□ 0.22
CDH20Q9HBT6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 AC087499.1-201ENST00000418141 1075 ntBASIC16.4■□□□□ 0.22
CDH20Q9HBT6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH20Q9HBT6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 TSPY17P-201ENST00000450329 467 ntBASIC16.39■□□□□ 0.21
CDH20Q9HBT6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 EGLN1P1-201ENST00000531623 762 ntBASIC16.39■□□□□ 0.21
CDH20Q9HBT6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH20Q9HBT6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 LINC01568-207ENST00000641790 1380 ntBASIC16.38■□□□□ 0.21
CDH20Q9HBT6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 KRT8P3-201ENST00000519669 1449 ntBASIC16.38■□□□□ 0.21
CDH20Q9HBT6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 AC133561.5-201ENST00000635547 218 ntBASIC16.38■□□□□ 0.21
CDH20Q9HBT6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms