Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 ID1-201ENST00000376105 1233 ntBASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 AC083906.6-201ENST00000641366 219 ntBASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHCBP1LQ9BZQ2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.54■□□□□ 0.56
SHCBP1LQ9BZQ2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 UNC93B4-201ENST00000505679 747 ntBASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.53■□□□□ 0.56
SHCBP1LQ9BZQ2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 HLA-L-209ENST00000420110 1011 ntBASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 TSPY23P-201ENST00000440136 739 ntBASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.52■□□□□ 0.56
SHCBP1LQ9BZQ2 HLA-A-209ENST00000638375 975 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms