Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.3■□□□□ 0.2
SFTPBP07988 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SFTPBP07988 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SFTPBP07988 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.29■□□□□ 0.2
SFTPBP07988 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
SFTPBP07988 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.29■□□□□ 0.2
SFTPBP07988 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.29■□□□□ 0.2
SFTPBP07988 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.29■□□□□ 0.2
SFTPBP07988 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SFTPBP07988 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.29■□□□□ 0.2
SFTPBP07988 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SFTPBP07988 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.29■□□□□ 0.2
SFTPBP07988 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SFTPBP07988 AL596275.1-201ENST00000423464 877 ntBASIC16.29■□□□□ 0.2
SFTPBP07988 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.29■□□□□ 0.2
SFTPBP07988 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.29■□□□□ 0.2
SFTPBP07988 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.29■□□□□ 0.2
SFTPBP07988 AC110285.5-201ENST00000611501 352 ntBASIC16.29■□□□□ 0.2
SFTPBP07988 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.29■□□□□ 0.2
SFTPBP07988 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SFTPBP07988 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.29■□□□□ 0.2
SFTPBP07988 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 AC104581.1-202ENST00000635932 2618 ntBASIC16.28■□□□□ 0.2
SFTPBP07988 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SFTPBP07988 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.28■□□□□ 0.2
SFTPBP07988 Z99916.2-201ENST00000604037 246 ntBASIC16.28■□□□□ 0.2
SFTPBP07988 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SFTPBP07988 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SFTPBP07988 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
SFTPBP07988 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.28■□□□□ 0.2
SFTPBP07988 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SFTPBP07988 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
SFTPBP07988 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
SFTPBP07988 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SFTPBP07988 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.27■□□□□ 0.2
SFTPBP07988 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.27■□□□□ 0.2
SFTPBP07988 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.27■□□□□ 0.2
SFTPBP07988 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.27■□□□□ 0.2
SFTPBP07988 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SFTPBP07988 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SFTPBP07988 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.27■□□□□ 0.2
SFTPBP07988 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms