Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.8■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.79■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.76■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.71■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.71■□□□□ 0.43
Trav15-1-dv6-1Q5R1D2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.69■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Gm30023-201ENSMUST00000197970 889 ntBASIC17.69■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-1-dv6-1Q5R1D2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms