Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 MAS1YLR163C 1389 nt8.4□□□□□ -1.06
HDA1P53973 GET2YER083C 858 nt8.4□□□□□ -1.06
HDA1P53973 PRY2YKR013W 990 nt8.4□□□□□ -1.06
HDA1P53973 RCF2YNR018W 675 nt8.4□□□□□ -1.06
HDA1P53973 COS10YNR075W 1125 nt8.4□□□□□ -1.06
HDA1P53973 DSC3YOR223W 879 nt8.4□□□□□ -1.06
HDA1P53973 HXK1YFR053C 1458 nt8.39□□□□□ -1.07
HDA1P53973 PDA1YER178W 1263 nt8.39□□□□□ -1.07
HDA1P53973 OPI1YHL020C 1215 nt8.39□□□□□ -1.07
HDA1P53973 YPL067CYPL067C 597 nt8.39□□□□□ -1.07
HDA1P53973 PMT7YDR307W 1989 nt8.39□□□□□ -1.07
HDA1P53973 LEO1YOR123C 1395 nt8.37□□□□□ -1.07
HDA1P53973 FIT1YDR534C 1587 nt8.36□□□□□ -1.07
HDA1P53973 PIL1YGR086C 1020 nt8.35□□□□□ -1.07
HDA1P53973 PET10YKR046C 852 nt8.35□□□□□ -1.07
HDA1P53973 YBL111CYBL111C 2004 nt8.35□□□□□ -1.07
HDA1P53973 MAS2YHR024C 1449 nt8.35□□□□□ -1.07
HDA1P53973 YBL113CYBL113C 2379 nt8.35□□□□□ -1.07
HDA1P53973 PTH2YBL057C 627 nt8.34□□□□□ -1.07
HDA1P53973 MCM5YLR274W 2328 nt8.33□□□□□ -1.08
HDA1P53973 MDH2YOL126C 1134 nt8.33□□□□□ -1.08
HDA1P53973 RUP1YOR138C 2016 nt8.33□□□□□ -1.08
HDA1P53973 YTH1YPR107C 627 nt8.33□□□□□ -1.08
HDA1P53973 SGF73YGL066W 1974 nt8.33□□□□□ -1.08
HDA1P53973 ADE16YLR028C 1776 nt8.33□□□□□ -1.08
HDA1P53973 LAT1YNL071W 1449 nt8.32□□□□□ -1.08
HDA1P53973 CAR2YLR438W 1275 nt8.32□□□□□ -1.08
HDA1P53973 ZIM17YNL310C 525 nt8.32□□□□□ -1.08
HDA1P53973 HNM1YGL077C 1692 nt8.32□□□□□ -1.08
HDA1P53973 PAM17YKR065C 594 nt8.31□□□□□ -1.08
HDA1P53973 CCW12YLR110C 402 nt8.3□□□□□ -1.08
HDA1P53973 YOX1YML027W 1158 nt8.3□□□□□ -1.08
HDA1P53973 CST26YBR042C 1194 nt8.3□□□□□ -1.08
HDA1P53973 FAF1YIL019W 1041 nt8.29□□□□□ -1.08
HDA1P53973 DCR2YLR361C 1737 nt8.29□□□□□ -1.08
HDA1P53973 YML122CYML122C 381 nt8.28□□□□□ -1.08
HDA1P53973 RSC9YML127W 1746 nt8.28□□□□□ -1.08
HDA1P53973 TRR2YHR106W 1029 nt8.27□□□□□ -1.09
HDA1P53973 snR30snR30 606 nt8.27□□□□□ -1.09
HDA1P53973 MDL2YPL270W 2322 nt8.26□□□□□ -1.09
HDA1P53973 HSV2YGR223C 1347 nt8.26□□□□□ -1.09
HDA1P53973 FRA1YLL029W 2250 nt8.25□□□□□ -1.09
HDA1P53973 NAF1YNL124W 1479 nt8.25□□□□□ -1.09
HDA1P53973 PFS2YNL317W 1398 nt8.24□□□□□ -1.09
HDA1P53973 AFG3YER017C 2286 nt8.24□□□□□ -1.09
HDA1P53973 URA1YKL216W 945 nt8.23□□□□□ -1.09
HDA1P53973 PUS7YOR243C 2031 nt8.23□□□□□ -1.09
HDA1P53973 TCB1YOR086C 3561 nt8.23□□□□□ -1.09
HDA1P53973 YDR306CYDR306C 1437 nt8.22□□□□□ -1.09
HDA1P53973 YNL067W-AYNL067W-A 147 nt8.22□□□□□ -1.09
HDA1P53973 PRS4YBL068W 981 nt8.22□□□□□ -1.09
HDA1P53973 MCP1YOR228C 909 nt8.22□□□□□ -1.09
HDA1P53973 YAH1YPL252C 519 nt8.22□□□□□ -1.09
HDA1P53973 YPR130CYPR130C 408 nt8.22□□□□□ -1.09
HDA1P53973 RDR1YOR380W 1641 nt8.21□□□□□ -1.09
HDA1P53973 NFS1YCL017C 1494 nt8.21□□□□□ -1.09
HDA1P53973 AIM46YHR199C 933 nt8.21□□□□□ -1.1
HDA1P53973 YJL144WYJL144W 315 nt8.21□□□□□ -1.1
HDA1P53973 YJL213WYJL213W 996 nt8.21□□□□□ -1.1
HDA1P53973 PUS5YLR165C 765 nt8.21□□□□□ -1.1
HDA1P53973 NSG2YNL156C 900 nt8.21□□□□□ -1.1
HDA1P53973 DPM1YPR183W 804 nt8.21□□□□□ -1.1
HDA1P53973 TPI1YDR050C 747 nt8.2□□□□□ -1.1
HDA1P53973 DMC1YER179W 1005 nt8.2□□□□□ -1.1
HDA1P53973 SNF7YLR025W 723 nt8.2□□□□□ -1.1
HDA1P53973 PUS4YNL292W 1212 nt8.2□□□□□ -1.1
HDA1P53973 YRF1-3YGR296W 5580 nt8.18□□□□□ -1.1
HDA1P53973 YRF1-6YNL339C 5580 nt8.18□□□□□ -1.1
HDA1P53973 YRF1-7YPL283C 5580 nt8.18□□□□□ -1.1
HDA1P53973 YEL034C-AYEL034C-A 603 nt8.18□□□□□ -1.1
HDA1P53973 YGL260WYGL260W 231 nt8.18□□□□□ -1.1
HDA1P53973 RTC4YNL254C 1206 nt8.17□□□□□ -1.1
HDA1P53973 YCL049CYCL049C 939 nt8.17□□□□□ -1.1
HDA1P53973 YER152CYER152C 1332 nt8.16□□□□□ -1.1
HDA1P53973 FHN1YGR131W 525 nt8.16□□□□□ -1.1
HDA1P53973 TOP3YLR234W 1971 nt8.16□□□□□ -1.1
HDA1P53973 YHM2YMR241W 945 nt8.16□□□□□ -1.1
HDA1P53973 CIT2YCR005C 1383 nt8.15□□□□□ -1.1
HDA1P53973 MPH3YJR160C 1809 nt8.15□□□□□ -1.11
HDA1P53973 REC114YMR133W 1287 nt8.14□□□□□ -1.11
HDA1P53973 PGI1YBR196C 1665 nt8.14□□□□□ -1.11
HDA1P53973 BNS1YGR230W 414 nt8.13□□□□□ -1.11
HDA1P53973 YLR162WYLR162W 357 nt8.13□□□□□ -1.11
HDA1P53973 LGE1YPL055C 999 nt8.13□□□□□ -1.11
HDA1P53973 SPE3YPR069C 882 nt8.13□□□□□ -1.11
HDA1P53973 DML1YMR211W 1428 nt8.12□□□□□ -1.11
HDA1P53973 YKL147CYKL147C 618 nt8.12□□□□□ -1.11
HDA1P53973 YLR030WYLR030W 792 nt8.12□□□□□ -1.11
HDA1P53973 ERG27YLR100W 1044 nt8.12□□□□□ -1.11
HDA1P53973 SML1YML058W 315 nt8.12□□□□□ -1.11
HDA1P53973 YMR074CYMR074C 438 nt8.12□□□□□ -1.11
HDA1P53973 BIO3YNR058W 1443 nt8.12□□□□□ -1.11
HDA1P53973 CDC7YDL017W 1524 nt8.1□□□□□ -1.11
HDA1P53973 HXT9YJL219W 1704 nt8.1□□□□□ -1.11
HDA1P53973 PET117YER058W 324 nt8.1□□□□□ -1.11
HDA1P53973 PLB2YMR006C 2121 nt8.1□□□□□ -1.11
HDA1P53973 YNR001W-AYNR001W-A 219 nt8.1□□□□□ -1.11
HDA1P53973 ERG24YNL280C 1317 nt8.09□□□□□ -1.11
HDA1P53973 CIA1YDR267C 993 nt8.09□□□□□ -1.11
HDA1P53973 YOR041CYOR041C 432 nt8.09□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 52.9 ms