RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 COX6B2Q6YFQ2 88 aa10.94□□□□□ -0.66
SF1-221ENST00000633899 A0A1B0GVX0 72 aa10.93□□□□□ -0.66
SF1-221ENST00000633899 C8orf87E5RJ46 101 aa10.93□□□□□ -0.66
SF1-221ENST00000633899 MTURNQ8N3F0 131 aa10.93□□□□□ -0.66
SF1-221ENST00000633899 KRTAP19-2Q3LHN2 52 aa10.92□□□□□ -0.66
SF1-221ENST00000633899 LCE2CQ5TA81 110 aa10.92□□□□□ -0.66
SF1-221ENST00000633899 SPCS1Q9Y6A9 102 aa10.92□□□□□ -0.66
SF1-221ENST00000633899 NOTCH2NLQ7Z3S9 236 aa10.91□□□□□ -0.66
SF1-221ENST00000633899 KRTAP16-1A8MUX0 517 aa10.9□□□□□ -0.66
SF1-221ENST00000633899 NDUFB1O75438 58 aa10.9□□□□□ -0.66
SF1-221ENST00000633899 COL5A1-AS1Q5SY13 56 aa10.9□□□□□ -0.66
SF1-221ENST00000633899 NREPQ16612 68 aa10.85□□□□□ -0.67
SF1-221ENST00000633899 MT1HP80294 61 aa10.83□□□□□ -0.68
SF1-221ENST00000633899 A8MWP4 228 aa10.82□□□□□ -0.68
SF1-221ENST00000633899 PCP4L1A6NKN8 68 aa10.77□□□□□ -0.69
SF1-221ENST00000633899 M0R2T5 61 aa10.76□□□□□ -0.69
SF1-221ENST00000633899 IGKV3D-7A0A0C4DH55 119 aa10.75□□□□□ -0.69
SF1-221ENST00000633899 C8orf17Q9NRJ1 99 aa10.75□□□□□ -0.69
SF1-221ENST00000633899 K7EP34 96 aa10.74□□□□□ -0.69
SF1-221ENST00000633899 KRTAP9-2Q9BYQ4 174 aa10.73□□□□□ -0.69
SF1-221ENST00000633899 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
SF1-221ENST00000633899 PRR15Q8IV56 129 aa10.71□□□□□ -0.69
SF1-221ENST00000633899 ZCCHC13Q8WW36 166 aaKnown RBP10.69□□□□□ -0.7
SF1-221ENST00000633899 GTF2H5Q6ZYL4 71 aa10.68□□□□□ -0.7
SF1-221ENST00000633899 BPY2O14599 106 aa10.67□□□□□ -0.7
SF1-221ENST00000633899 Q6ZVQ6 151 aa10.67□□□□□ -0.7
SF1-221ENST00000633899 Q8N9P0 234 aaPredicted RBP10.67□□□□□ -0.7
SF1-221ENST00000633899 PRO0461Q9UI25 63 aa10.66□□□□□ -0.7
SF1-221ENST00000633899 FAM236DA0A1B0GTK5 79 aa10.65□□□□□ -0.7
SF1-221ENST00000633899 FAM236CP0DP71 79 aa10.65□□□□□ -0.7
SF1-221ENST00000633899 K7EQZ3 153 aa10.63□□□□□ -0.71
SF1-221ENST00000633899 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
SF1-221ENST00000633899 FLGP20930 4061 aaPredicted RBP10.63□□□□□ -0.71
SF1-221ENST00000633899 TMEM254Q8TBM7 123 aa10.62□□□□□ -0.71
SF1-221ENST00000633899 MMP24-AS1A0A0U1RRL7 71 aa10.61□□□□□ -0.71
SF1-221ENST00000633899 KRTAP10-6P60371 365 aaPredicted RBP10.6□□□□□ -0.71
SF1-221ENST00000633899 MRPL34Q9BQ48 92 aaKnown RBP10.6□□□□□ -0.71
SF1-221ENST00000633899 hDV103S1A0JD37 113 aa10.58□□□□□ -0.72
SF1-221ENST00000633899 HRES1P13985 223 aa10.57□□□□□ -0.72
SF1-221ENST00000633899 UBL5Q9BZL1 73 aa10.57□□□□□ -0.72
SF1-221ENST00000633899 NDUFS5O43920 106 aa10.56□□□□□ -0.72
SF1-221ENST00000633899 LORP23490 312 aaPredicted RBP10.56□□□□□ -0.72
SF1-221ENST00000633899 F8W1H4 67 aa10.55□□□□□ -0.72
SF1-221ENST00000633899 SPINK7P58062 85 aa10.55□□□□□ -0.72
SF1-221ENST00000633899 KRTAP9-6A0A140TA67 174 aa10.52□□□□□ -0.73
SF1-221ENST00000633899 LINC00846Q9NV44 126 aa10.52□□□□□ -0.73
SF1-221ENST00000633899 Q8N9L7 120 aa10.51□□□□□ -0.73
SF1-221ENST00000633899 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
SF1-221ENST00000633899 MPLKIPQ8TAP9 179 aa10.5□□□□□ -0.73
SF1-221ENST00000633899 WFDC13Q8IUB5 93 aa10.49□□□□□ -0.73
SF1-221ENST00000633899 ETDBQ3ZM63 59 aa10.48□□□□□ -0.73
SF1-221ENST00000633899 CASC2Q6XLA1 102 aa10.47□□□□□ -0.73
SF1-221ENST00000633899 HCG22E2RYF7 251 aa10.39□□□□□ -0.75
SF1-221ENST00000633899 IGKV2D-30A0A075B6S6 120 aa10.33□□□□□ -0.76
SF1-221ENST00000633899 IGKV2-30P06310 120 aa10.33□□□□□ -0.76
SF1-221ENST00000633899 CXCL6P80162 114 aa10.32□□□□□ -0.76
SF1-221ENST00000633899 Q5W150 140 aa10.31□□□□□ -0.76
SF1-221ENST00000633899 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
SF1-221ENST00000633899 ACYP1P07311 99 aa10.26□□□□□ -0.77
SF1-221ENST00000633899 KRTAP9-8Q9BYQ0 159 aa10.24□□□□□ -0.77
SF1-221ENST00000633899 FAM240AA0A1B0GVK7 77 aa10.2□□□□□ -0.78
SF1-221ENST00000633899 TP53AIP1Q9HCN2 124 aa10.18□□□□□ -0.78
SF1-221ENST00000633899 FSIP2Q5CZC0 6907 aa10.17□□□□□ -0.78
SF1-221ENST00000633899 CRCT1Q9UGL9 99 aa10.17□□□□□ -0.78
SF1-221ENST00000633899 H1FX-AS1Q4G0G2 97 aa10.16□□□□□ -0.78
SF1-221ENST00000633899 A0A1B0GV90 55 aa10.15□□□□□ -0.78
SF1-221ENST00000633899 ATP5EP2Q5VTU8 51 aa10.15□□□□□ -0.78
SF1-221ENST00000633899 MT2AP02795 61 aa10.14□□□□□ -0.79
SF1-221ENST00000633899 C4orf26Q17RF5 130 aa10.1□□□□□ -0.79
SF1-221ENST00000633899 KRTAP10-10P60014 251 aa10.09□□□□□ -0.79
SF1-221ENST00000633899 HIST1H4AP62805 103 aaKnown RBP10.09□□□□□ -0.79
SF1-221ENST00000633899 MT1FP04733 61 aa10.06□□□□□ -0.8
SF1-221ENST00000633899 LINC00643Q86TS7 51 aa10.01□□□□□ -0.81
SF1-221ENST00000633899 TRAV22A0A0B4J277 110 aa9.97□□□□□ -0.81
SF1-221ENST00000633899 C1orf64Q8NEQ6 169 aa9.95□□□□□ -0.82
SF1-221ENST00000633899 J3QR89 54 aa9.94□□□□□ -0.82
SF1-221ENST00000633899 A0A087WVE0 104 aa9.91□□□□□ -0.82
SF1-221ENST00000633899 LOC101927531A0A1B0GV80 90 aa9.91□□□□□ -0.82
SF1-221ENST00000633899 UQCRQO14949 82 aa9.91□□□□□ -0.82
SF1-221ENST00000633899 KRTAP9-3Q9BYQ3 159 aa9.91□□□□□ -0.82
SF1-221ENST00000633899 CYP4F30PQ9H0H9 118 aa9.91□□□□□ -0.82
SF1-221ENST00000633899 S4R3F8 94 aa9.88□□□□□ -0.83
SF1-221ENST00000633899 KRTAP3-1Q9BYR8 98 aa9.87□□□□□ -0.83
SF1-221ENST00000633899 H0Y9P7 68 aa9.86□□□□□ -0.83
SF1-221ENST00000633899 ATOX1O00244 68 aa9.86□□□□□ -0.83
SF1-221ENST00000633899 C5orf47Q569G3 176 aa9.84□□□□□ -0.83
SF1-221ENST00000633899 LCE2BO14633 110 aa9.83□□□□□ -0.84
SF1-221ENST00000633899 USH2AO75445 5202 aa9.82□□□□□ -0.84
SF1-221ENST00000633899 CSAG1Q6PB30 78 aa9.78□□□□□ -0.84
SF1-221ENST00000633899 LCA10Q71F78 164 aa9.77□□□□□ -0.85
SF1-221ENST00000633899 MP68P56378 58 aa9.73□□□□□ -0.85
SF1-221ENST00000633899 FAM236AA0A1B0GUQ0 79 aa9.72□□□□□ -0.85
SF1-221ENST00000633899 FAM236BA0A1B0GV22 79 aa9.72□□□□□ -0.85
SF1-221ENST00000633899 LINC00208Q96KT6 92 aa9.72□□□□□ -0.85
SF1-221ENST00000633899 OCR1Q9BZK8 76 aa9.7□□□□□ -0.86
SF1-221ENST00000633899 SSPOA2VEC9 5147 aa9.69□□□□□ -0.86
SF1-221ENST00000633899 SCGB1A1P11684 91 aa9.66□□□□□ -0.86
SF1-221ENST00000633899 KRTAP19-1Q8IUB9 90 aa9.62□□□□□ -0.87
SF1-221ENST00000633899 K7ERU9 68 aa9.61□□□□□ -0.87
SF1-221ENST00000633899 A8MUN3 132 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms