RNA–Protein interactions for RNA: ENST00000574429.1

TXNDC17-206, Transcript of thioredoxin domain containing 17, humanhuman

Gene TXNDC17, Length 2,100 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNDC17-206ENST00000574429 DDX3XO00571 662 aaKnown RBP eCLIP16.43■□□□□ 0.221e-12■■■■□ 25.3
TXNDC17-206ENST00000574429 LARP4Q71RC2 724 aaKnown RBP eCLIP14.91□□□□□ -0.022e-12■■■■■ 56.4
TXNDC17-206ENST00000574429 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.472e-9■■■■■ 75.6
TXNDC17-206ENST00000574429 EIF3DO15371 548 aaKnown RBP eCLIP16.78■□□□□ 0.283e-9■■■■■ 32.4
TXNDC17-206ENST00000574429 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.311e-8■■□□□ 11.5
TXNDC17-206ENST00000574429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.78■■□□□ 1.241e-7■■■■■ 59.4
TXNDC17-206ENST00000574429 YBX3P16989 372 aaKnown RBP eCLIP17.29■□□□□ 0.367e-7■■□□□ 11.4
TXNDC17-206ENST00000574429 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.57□□□□□ -0.082e-6■■■□□ 18.8
TXNDC17-206ENST00000574429 SF3B1O75533 1304 aaKnown RBP eCLIP15.81■□□□□ 0.123e-6■■■■■ 44.6
TXNDC17-206ENST00000574429 FTOQ9C0B1 505 aaKnown RBP eCLIP17.68■□□□□ 0.424e-6■■□□□ 11.8
Retrieved 10 of 10 RNA–protein pairs in 4.9 ms