RNA–Protein interactions for RNA: ENST00000533723.1

TMEM41B-205, Transcript of transmembrane protein 41B, humanhuman

TSL 2 BASIC

Gene TMEM41B, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-205ENST00000533723 SF3B1O75533 1304 aaKnown RBP eCLIP23.12■■□□□ 1.291e-6■■■■■ 75.2
TMEM41B-205ENST00000533723 NCBP2P52298 156 aaKnown RBP eCLIP18.81■□□□□ 0.64e-19■■■■■ 71.7
TMEM41B-205ENST00000533723 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.51■■□□□ 1.673e-6■■■■□ 25
TMEM41B-205ENST00000533723 HNRNPKP61978 463 aaKnown RBP eCLIP21.33■■□□□ 1.013e-7■■■■□ 24
TMEM41B-205ENST00000533723 RPS3P23396 243 aaKnown RBP eCLIP19.95■□□□□ 0.782e-6■■■■□ 23.7
TMEM41B-205ENST00000533723 PPIGQ13427 754 aaKnown RBP eCLIP24.73■■□□□ 1.552e-7■■■■□ 19.7
TMEM41B-205ENST00000533723 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.25■□□□□ 0.836e-7■■■□□ 19.2
TMEM41B-205ENST00000533723 KHSRPQ92945 711 aaKnown RBP eCLIP23.86■■□□□ 1.412e-11■■■□□ 18
TMEM41B-205ENST00000533723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.86■■■□□ 2.213e-13■■■□□ 17
TMEM41B-205ENST00000533723 ILF3Q12906 894 aaKnown RBP eCLIP20.91■□□□□ 0.947e-6■■■□□ 16
TMEM41B-205ENST00000533723 TIA1P31483 386 aaKnown RBP eCLIP18.85■□□□□ 0.611e-7■■■□□ 14.6
TMEM41B-205ENST00000533723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.59■■■■□ 3.133e-6■■□□□ 14
TMEM41B-205ENST00000533723 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22■■□□□ 1.119e-6■■□□□ 12.8
TMEM41B-205ENST00000533723 EFTUD2Q15029 972 aaKnown RBP eCLIP19.42■□□□□ 0.72e-8■■□□□ 12.7
TMEM41B-205ENST00000533723 RBM15Q96T37 977 aaKnown RBP eCLIP21.03■□□□□ 0.962e-7■■□□□ 12.3
TMEM41B-205ENST00000533723 NONOQ15233 471 aaKnown RBP eCLIP23.45■■□□□ 1.342e-6■■□□□ 12
TMEM41B-205ENST00000533723 ZNF622Q969S3 477 aaKnown RBP eCLIP27.87■■■□□ 2.058e-7■□□□□ 11.2
TMEM41B-205ENST00000533723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.86■■■□□ 2.856e-6■□□□□ 11
TMEM41B-205ENST00000533723 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.23■■□□□ 1.631e-6■□□□□ 10
TMEM41B-205ENST00000533723 SRSF1Q07955 248 aaKnown RBP eCLIP20.56■□□□□ 0.881e-6■□□□□ 9.9
TMEM41B-205ENST00000533723 DDX3XO00571 662 aaKnown RBP eCLIP20.8■□□□□ 0.924e-14■□□□□ 9.8
TMEM41B-205ENST00000533723 SND1Q7KZF4 910 aaKnown RBP eCLIP21.59■■□□□ 1.053e-6■□□□□ 9.6
TMEM41B-205ENST00000533723 ZRANB2O95218 330 aaKnown RBP eCLIP20.35■□□□□ 0.854e-7■□□□□ 9.2
Retrieved 23 of 23 RNA–protein pairs in 8.2 ms