RNA–Protein interactions for RNA: ENST00000407236.5

PPARA-203, Transcript of peroxisome proliferator activated receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPARA, Length 9,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARA-203ENST00000407236 NISCHQ9Y2I1 1504 aa14.73□□□□□ -0.05
PPARA-203ENST00000407236 MYT1Q01538 1121 aa14.35□□□□□ -0.11
PPARA-203ENST00000407236 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
PPARA-203ENST00000407236 TTBK1Q5TCY1 1321 aaPredicted RBP13.52□□□□□ -0.24
PPARA-203ENST00000407236 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
PPARA-203ENST00000407236 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
PPARA-203ENST00000407236 FAM9AQ8IZU1 332 aaPredicted RBP13.15□□□□□ -0.3
PPARA-203ENST00000407236 CCDC180Q9P1Z9 1646 aa12.99□□□□□ -0.33
PPARA-203ENST00000407236 CENPBP07199 599 aaPredicted RBP12.97□□□□□ -0.33
PPARA-203ENST00000407236 CCER1Q8TC90 406 aaPredicted RBP12.86□□□□□ -0.35
PPARA-203ENST00000407236 CLSPNQ9HAW4 1339 aa12.82□□□□□ -0.36
PPARA-203ENST00000407236 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
PPARA-203ENST00000407236 YTHDC1Q96MU7 727 aaKnown RBP12.7□□□□□ -0.38
PPARA-203ENST00000407236 APLP2Q06481 763 aa12.6□□□□□ -0.39
PPARA-203ENST00000407236 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
PPARA-203ENST00000407236 HRCP23327 699 aa12.55□□□□□ -0.4
PPARA-203ENST00000407236 SUPT5HO00267 1087 aaKnown RBP12.47□□□□□ -0.41
PPARA-203ENST00000407236 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
PPARA-203ENST00000407236 MYO15BQ96JP2 1530 aa12.38□□□□□ -0.43
PPARA-203ENST00000407236 TRIM26Q12899 539 aaPredicted RBP12.36□□□□□ -0.43
PPARA-203ENST00000407236 NACADO15069 1562 aa12.36□□□□□ -0.43
PPARA-203ENST00000407236 NEFLP07196 543 aa12.32□□□□□ -0.44
PPARA-203ENST00000407236 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
PPARA-203ENST00000407236 ZCCHC6Q5VYS8 1495 aaKnown RBP12.29□□□□□ -0.44
PPARA-203ENST00000407236 PCGF6Q9BYE7 350 aa12.23□□□□□ -0.45
PPARA-203ENST00000407236 SHROOM4Q9ULL8 1493 aa12.22□□□□□ -0.45
PPARA-203ENST00000407236 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.45
PPARA-203ENST00000407236 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
PPARA-203ENST00000407236 RTL5Q5HYW3 569 aaPredicted RBP12.04□□□□□ -0.48
PPARA-203ENST00000407236 DAXXQ9UER7 740 aaPredicted RBP12□□□□□ -0.49
PPARA-203ENST00000407236 ABCC9O60706 1549 aa12□□□□□ -0.49
PPARA-203ENST00000407236 GLIPR1L2Q4G1C9 344 aa11.97□□□□□ -0.49
PPARA-203ENST00000407236 EEA1Q15075 1411 aa11.94□□□□□ -0.5
PPARA-203ENST00000407236 UBTFP17480 764 aaKnown RBP11.85□□□□□ -0.51
PPARA-203ENST00000407236 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.51
PPARA-203ENST00000407236 CHIC1Q5VXU3 224 aa11.76□□□□□ -0.53
PPARA-203ENST00000407236 SCRIBQ14160 1630 aa11.76□□□□□ -0.53
PPARA-203ENST00000407236 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
PPARA-203ENST00000407236 CDK11AQ9UQ88 783 aaPredicted RBP11.74□□□□□ -0.53
PPARA-203ENST00000407236 SMARCA2P51531 1590 aa11.73□□□□□ -0.53
PPARA-203ENST00000407236 ZNF316A6NFI3 1004 aaPredicted RBP11.71□□□□□ -0.53
PPARA-203ENST00000407236 ARID4BQ4LE39 1312 aaPredicted RBP11.71□□□□□ -0.54
PPARA-203ENST00000407236 ERICH6BQ5W0A0 696 aa11.63□□□□□ -0.55
PPARA-203ENST00000407236 ANP32EQ9BTT0 268 aa11.63□□□□□ -0.55
PPARA-203ENST00000407236 GTF3C3Q9Y5Q9 886 aa11.58□□□□□ -0.56
PPARA-203ENST00000407236 BAZ1BQ9UIG0 1483 aaKnown RBP11.57□□□□□ -0.56
PPARA-203ENST00000407236 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
PPARA-203ENST00000407236 EIF5BO60841 1220 aaKnown RBP11.51□□□□□ -0.57
PPARA-203ENST00000407236 TIMELESSQ9UNS1 1208 aa11.49□□□□□ -0.57
PPARA-203ENST00000407236 NEUROD1Q13562 356 aa11.49□□□□□ -0.57
PPARA-203ENST00000407236 RSF1Q96T23 1441 aaPredicted RBP11.47□□□□□ -0.57
PPARA-203ENST00000407236 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
PPARA-203ENST00000407236 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
PPARA-203ENST00000407236 ANP32AP39687 249 aaKnown RBP11.47□□□□□ -0.57
PPARA-203ENST00000407236 NCLP19338 710 aaKnown RBP11.46□□□□□ -0.57
PPARA-203ENST00000407236 EHMT2Q96KQ7 1210 aa11.45□□□□□ -0.58
PPARA-203ENST00000407236 KIF27Q86VH2 1401 aa11.43□□□□□ -0.58
PPARA-203ENST00000407236 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
PPARA-203ENST00000407236 ATP1B4Q9UN42 357 aaPredicted RBP11.41□□□□□ -0.58
PPARA-203ENST00000407236 RANGAP1P46060 587 aaPredicted RBP11.41□□□□□ -0.58
PPARA-203ENST00000407236 CEP164Q9UPV0 1460 aa11.39□□□□□ -0.59
PPARA-203ENST00000407236 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
PPARA-203ENST00000407236 ANP32BQ92688 251 aaKnown RBP11.38□□□□□ -0.59
PPARA-203ENST00000407236 WRNQ14191 1432 aaPredicted RBP eCLIP11.37□□□□□ -0.59
PPARA-203ENST00000407236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.37□□□□□ -0.59
PPARA-203ENST00000407236 HNRNPUL2Q1KMD3 747 aaKnown RBP11.37□□□□□ -0.59
PPARA-203ENST00000407236 GOLGA3Q08378 1498 aa11.37□□□□□ -0.59
PPARA-203ENST00000407236 PABPN1Q86U42 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
PPARA-203ENST00000407236 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
PPARA-203ENST00000407236 CEP162Q5TB80 1403 aa11.34□□□□□ -0.59
PPARA-203ENST00000407236 TOP2AP11388 1531 aaKnown RBP11.34□□□□□ -0.59
PPARA-203ENST00000407236 ANP32CO43423 234 aa11.33□□□□□ -0.6
PPARA-203ENST00000407236 USP35Q9P2H5 1018 aa11.31□□□□□ -0.6
PPARA-203ENST00000407236 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
PPARA-203ENST00000407236 PPARGC1BQ86YN6 1023 aaKnown RBP11.31□□□□□ -0.6
PPARA-203ENST00000407236 NEFMP07197 916 aa11.3□□□□□ -0.6
PPARA-203ENST00000407236 PPM1GO15355 546 aaPredicted RBP11.27□□□□□ -0.61
PPARA-203ENST00000407236 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
PPARA-203ENST00000407236 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
PPARA-203ENST00000407236 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
PPARA-203ENST00000407236 BCL11AQ9H165 835 aa11.22□□□□□ -0.61
PPARA-203ENST00000407236 SCAF1Q9H7N4 1312 aaKnown RBP11.21□□□□□ -0.61
PPARA-203ENST00000407236 SMARCA4P51532 1647 aa11.21□□□□□ -0.61
PPARA-203ENST00000407236 CARMIL2Q6F5E8 1435 aa11.2□□□□□ -0.62
PPARA-203ENST00000407236 HMGXB3Q12766 1538 aa11.2□□□□□ -0.62
PPARA-203ENST00000407236 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
PPARA-203ENST00000407236 CLIP1P30622 1438 aa11.19□□□□□ -0.62
PPARA-203ENST00000407236 FMN1Q68DA7 1419 aa11.17□□□□□ -0.62
PPARA-203ENST00000407236 ESF1Q9H501 851 aaKnown RBP11.17□□□□□ -0.62
PPARA-203ENST00000407236 PTMSP20962 102 aa11.17□□□□□ -0.62
PPARA-203ENST00000407236 UPF2Q9HAU5 1272 aaKnown RBP11.17□□□□□ -0.62
PPARA-203ENST00000407236 CCER2I3L3R5 266 aa11.16□□□□□ -0.62
PPARA-203ENST00000407236 NCAPD3P42695 1498 aa11.16□□□□□ -0.62
PPARA-203ENST00000407236 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.62
PPARA-203ENST00000407236 CHMP7Q8WUX9 453 aaPredicted RBP11.15□□□□□ -0.62
PPARA-203ENST00000407236 TSPY4P0CV99 314 aa11.13□□□□□ -0.63
PPARA-203ENST00000407236 TSPY10P0CW01 314 aa11.13□□□□□ -0.63
PPARA-203ENST00000407236 MTUS2Q5JR59 1369 aa11.13□□□□□ -0.63
PPARA-203ENST00000407236 CADPSQ9ULU8 1353 aa11.13□□□□□ -0.63
PPARA-203ENST00000407236 BCANQ96GW7 911 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms