RNA–Protein interactions for RNA: ENST00000367485.4

PRG4-203, Transcript of proteoglycan 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRG4, Length 4,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4-203ENST00000367485 NISCHQ9Y2I1 1504 aa9.47□□□□□ -0.89
PRG4-203ENST00000367485 ABCC9O60706 1549 aa8.86□□□□□ -0.99
PRG4-203ENST00000367485 CCDC180Q9P1Z9 1646 aa8.78□□□□□ -1
PRG4-203ENST00000367485 RB1CC1Q8TDY2 1594 aa8.54□□□□□ -1.04
PRG4-203ENST00000367485 NACADO15069 1562 aa8.43□□□□□ -1.06
PRG4-203ENST00000367485 DNAJC5BQ9UF47 199 aa8.39□□□□□ -1.07
PRG4-203ENST00000367485 SHROOM4Q9ULL8 1493 aa8.39□□□□□ -1.07
PRG4-203ENST00000367485 DNAJC5Q9H3Z4 198 aa8.3□□□□□ -1.08
PRG4-203ENST00000367485 MYO15BQ96JP2 1530 aa8.28□□□□□ -1.08
PRG4-203ENST00000367485 CECR2Q9BXF3 1484 aa8.14□□□□□ -1.11
PRG4-203ENST00000367485 PABPN1Q86U42 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
PRG4-203ENST00000367485 CUX2O14529 1486 aa8.08□□□□□ -1.12
PRG4-203ENST00000367485 DCAF8L2P0C7V8 631 aa8.05□□□□□ -1.12
PRG4-203ENST00000367485 CC2D2AQ9P2K1 1620 aa8.01□□□□□ -1.13
PRG4-203ENST00000367485 BICRAQ9NZM4 1560 aa8.01□□□□□ -1.13
PRG4-203ENST00000367485 DCAF1Q9Y4B6 1507 aa7.99□□□□□ -1.13
PRG4-203ENST00000367485 PELP1Q8IZL8 1130 aaKnown RBP7.96□□□□□ -1.14
PRG4-203ENST00000367485 EIF4G1Q04637 1599 aaKnown RBP7.96□□□□□ -1.14
PRG4-203ENST00000367485 UNC13AQ9UPW8 1703 aa7.94□□□□□ -1.14
PRG4-203ENST00000367485 ERCC6Q03468 1493 aa7.88□□□□□ -1.15
PRG4-203ENST00000367485 SCRIBQ14160 1630 aa7.8□□□□□ -1.16
PRG4-203ENST00000367485 ZCCHC6Q5VYS8 1495 aaKnown RBP7.77□□□□□ -1.17
PRG4-203ENST00000367485 NCAPD3P42695 1498 aa7.72□□□□□ -1.17
PRG4-203ENST00000367485 FAM9AQ8IZU1 332 aaPredicted RBP7.71□□□□□ -1.17
PRG4-203ENST00000367485 TRIM41Q8WV44 630 aa7.69□□□□□ -1.18
PRG4-203ENST00000367485 SMARCA2P51531 1590 aa7.68□□□□□ -1.18
PRG4-203ENST00000367485 PDS5BQ9NTI5 1447 aa7.67□□□□□ -1.18
PRG4-203ENST00000367485 HMGXB3Q12766 1538 aa7.65□□□□□ -1.18
PRG4-203ENST00000367485 LAMC3Q9Y6N6 1575 aa7.62□□□□□ -1.19
PRG4-203ENST00000367485 MYT1Q01538 1121 aa7.59□□□□□ -1.19
PRG4-203ENST00000367485 AEBP2Q6ZN18 517 aaPredicted RBP7.59□□□□□ -1.19
PRG4-203ENST00000367485 CCER1Q8TC90 406 aaPredicted RBP7.59□□□□□ -1.19
PRG4-203ENST00000367485 OSCARQ8IYS5 282 aa7.59□□□□□ -1.19
PRG4-203ENST00000367485 ATAD2BQ9ULI0 1458 aa7.55□□□□□ -1.2
PRG4-203ENST00000367485 MRC2Q9UBG0 1479 aa7.53□□□□□ -1.2
PRG4-203ENST00000367485 BAZ1BQ9UIG0 1483 aaKnown RBP7.53□□□□□ -1.2
PRG4-203ENST00000367485 THOC2Q8NI27 1593 aaKnown RBP7.53□□□□□ -1.2
PRG4-203ENST00000367485 APLP2Q06481 763 aa7.5□□□□□ -1.21
PRG4-203ENST00000367485 ERICH6Q7L0X2 663 aa7.48□□□□□ -1.21
PRG4-203ENST00000367485 BAZ1AQ9NRL2 1556 aaPredicted RBP7.48□□□□□ -1.21
PRG4-203ENST00000367485 WDR62O43379 1518 aa7.45□□□□□ -1.22
PRG4-203ENST00000367485 CADPSQ9ULU8 1353 aa7.45□□□□□ -1.22
PRG4-203ENST00000367485 PEG3Q9GZU2 1588 aa7.44□□□□□ -1.22
PRG4-203ENST00000367485 SMARCA4P51532 1647 aa7.43□□□□□ -1.22
PRG4-203ENST00000367485 CEP164Q9UPV0 1460 aa7.43□□□□□ -1.22
PRG4-203ENST00000367485 NESP48681 1621 aa7.39□□□□□ -1.23
PRG4-203ENST00000367485 TRHP20396 242 aaPredicted RBP7.39□□□□□ -1.23
PRG4-203ENST00000367485 RSF1Q96T23 1441 aaPredicted RBP7.38□□□□□ -1.23
PRG4-203ENST00000367485 ABCC8Q09428 1581 aa7.37□□□□□ -1.23
PRG4-203ENST00000367485 IFT140Q96RY7 1462 aa7.35□□□□□ -1.23
PRG4-203ENST00000367485 KIF21AQ7Z4S6 1674 aa7.33□□□□□ -1.24
PRG4-203ENST00000367485 RIMBP3CA6NJZ7 1639 aa7.32□□□□□ -1.24
PRG4-203ENST00000367485 RIMBP3BA6NNM3 1639 aa7.32□□□□□ -1.24
PRG4-203ENST00000367485 RIMBP3Q9UFD9 1639 aa7.32□□□□□ -1.24
PRG4-203ENST00000367485 ARHGEF11O15085 1522 aa7.32□□□□□ -1.24
PRG4-203ENST00000367485 YTHDC1Q96MU7 727 aaKnown RBP7.32□□□□□ -1.24
PRG4-203ENST00000367485 FANCD2Q9BXW9 1451 aa7.31□□□□□ -1.24
PRG4-203ENST00000367485 CYB5RLQ6IPT4 315 aa7.26□□□□□ -1.25
PRG4-203ENST00000367485 WDR97A6NE52 1622 aa7.26□□□□□ -1.25
PRG4-203ENST00000367485 CFTRP13569 1480 aa7.25□□□□□ -1.25
PRG4-203ENST00000367485 NEFLP07196 543 aa7.23□□□□□ -1.25
PRG4-203ENST00000367485 CENPBP07199 599 aaPredicted RBP7.23□□□□□ -1.25
PRG4-203ENST00000367485 DAXXQ9UER7 740 aaPredicted RBP7.2□□□□□ -1.26
PRG4-203ENST00000367485 SUPT5HO00267 1087 aaKnown RBP7.2□□□□□ -1.26
PRG4-203ENST00000367485 SYNJ1O43426 1573 aa7.2□□□□□ -1.26
PRG4-203ENST00000367485 ARAP1Q96P48 1450 aa7.18□□□□□ -1.26
PRG4-203ENST00000367485 MROH2BQ7Z745 1585 aa7.16□□□□□ -1.26
PRG4-203ENST00000367485 URB2Q14146 1524 aaKnown RBP7.16□□□□□ -1.26
PRG4-203ENST00000367485 MAGI1Q96QZ7 1491 aaPredicted RBP7.14□□□□□ -1.27
PRG4-203ENST00000367485 CHMP7Q8WUX9 453 aaPredicted RBP7.13□□□□□ -1.27
PRG4-203ENST00000367485 PRDM2Q13029 1718 aa7.13□□□□□ -1.27
PRG4-203ENST00000367485 NPM1P06748 294 aaKnown RBP eCLIP7.13□□□□□ -1.27
PRG4-203ENST00000367485 DNMBPQ6XZF7 1577 aa7.13□□□□□ -1.27
PRG4-203ENST00000367485 FBLN2P98095 1184 aa7.12□□□□□ -1.27
PRG4-203ENST00000367485 TOP2AP11388 1531 aaKnown RBP7.11□□□□□ -1.27
PRG4-203ENST00000367485 TOPBP1Q92547 1522 aa7.11□□□□□ -1.27
PRG4-203ENST00000367485 EIF4G3O43432 1585 aaKnown RBP7.1□□□□□ -1.27
PRG4-203ENST00000367485 GRIN2BQ13224 1484 aa7.08□□□□□ -1.28
PRG4-203ENST00000367485 GAPVD1Q14C86 1478 aa7.08□□□□□ -1.28
PRG4-203ENST00000367485 ZEB1P37275 1124 aaPredicted RBP7.08□□□□□ -1.28
PRG4-203ENST00000367485 CLASP1Q7Z460 1538 aa7.07□□□□□ -1.28
PRG4-203ENST00000367485 TTBK1Q5TCY1 1321 aaPredicted RBP7.07□□□□□ -1.28
PRG4-203ENST00000367485 SYNJ2O15056 1496 aa7.07□□□□□ -1.28
PRG4-203ENST00000367485 ERCC6L2Q5T890 1561 aa7.06□□□□□ -1.28
PRG4-203ENST00000367485 CHD1O14646 1710 aa7.06□□□□□ -1.28
PRG4-203ENST00000367485 ZNF608Q9ULD9 1512 aaPredicted RBP7.05□□□□□ -1.28
PRG4-203ENST00000367485 ILDR1Q86SU0 546 aaPredicted RBP7.05□□□□□ -1.28
PRG4-203ENST00000367485 SOGA1O94964 1423 aa7.03□□□□□ -1.28
PRG4-203ENST00000367485 EHMT2Q96KQ7 1210 aa7.02□□□□□ -1.29
PRG4-203ENST00000367485 SNAPC4Q5SXM2 1469 aa7.01□□□□□ -1.29
PRG4-203ENST00000367485 FBXO41Q8TF61 875 aa7.01□□□□□ -1.29
PRG4-203ENST00000367485 ATP1B4Q9UN42 357 aaPredicted RBP7□□□□□ -1.29
PRG4-203ENST00000367485 AQRO60306 1485 aaKnown RBP eCLIP7□□□□□ -1.29
PRG4-203ENST00000367485 TARBP1Q13395 1621 aaKnown RBP7□□□□□ -1.29
PRG4-203ENST00000367485 MYT1LQ9UL68 1186 aa6.99□□□□□ -1.29
PRG4-203ENST00000367485 POLA1P09884 1462 aaPredicted RBP6.98□□□□□ -1.29
PRG4-203ENST00000367485 WIZO95785 1651 aa6.98□□□□□ -1.29
PRG4-203ENST00000367485 ABCC10Q5T3U5 1492 aa6.95□□□□□ -1.3
PRG4-203ENST00000367485 MAPKBP1O60336 1514 aa6.95□□□□□ -1.3
PRG4-203ENST00000367485 KDM6BO15054 1643 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms