RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 CATSPER3Q86XQ3 398 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CEP57Q86XR8 500 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 RNF168Q8IYW5 571 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 ELMOD1Q8N336 334 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 GALNT15Q8N3T1 639 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 SPEM1Q8N4L4 309 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 OTUD6BQ8N6M0 293 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 GPT2Q8TD30 523 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 WFIKKN2Q8TEU8 576 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 DOCK7Q96N67 2140 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 EDEM2Q9BV94 578 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 PLA2G2FQ9BZM2 168 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 PDZD7Q9H5P4 517 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 MVB12BQ9H7P6 319 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CLK4Q9HAZ1 481 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 MARCH5Q9NX47 278 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 GDE1Q9NZC3 331 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CDH7Q9ULB5 785 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 SETD2Q9BYW2 2564 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 MYO18AQ92614 2054 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 LRRK2Q5S007 2527 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 A0A087WYN8 130 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 LNP1A1A4G5 178 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 CASTOR2A6NHX0 329 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 CCDC169A6NNP5 214 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 H0Y626 953 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 H3BQV1 296 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TULP2O00295 520 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 ZNF197O14709 1029 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 B4GALT5O43286 388 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 LDB3O75112 727 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 MED24O75448 989 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 SERPINI2O75830 405 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TRIM16O95361 564 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TK1P04183 234 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 MCF2P10911 925 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TNNT1P13805 278 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 PAX3P23760 479 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 U2AF2P26368 475 aaKnown RBP eCLIP4.25□□□□□ -1.739e-7■■■■□ 23.5
GTF3C3-207ENST00000451088 C21orf33P30042 268 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 RPL9P32969 192 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 PRPHP41219 470 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 PTPN9P43378 593 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 IRX4P78413 519 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 GABPB1Q06547 395 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 FAM27E3Q08E93 113 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 PDCD11Q14690 1871 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 BRD3Q15059 726 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 ZKSCAN8Q15776 578 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TIGD6Q17RP2 521 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 CBWD5Q5RIA9 395 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TPGS2Q68CL5 300 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 CCDC83Q8IWF9 413 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 LEMD2Q8NC56 503 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 APPL2Q8NEU8 664 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 ZMIZ2Q8NF64 920 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 FAM3CQ92520 227 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 FGF13Q92913 245 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 AK8Q96MA6 479 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 DUX5Q96PT3 197 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TSPAN18Q96SJ8 248 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 MYCBPQ99417 103 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 KXD1Q9BQD3 176 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TCHPQ9BT92 498 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 CTDSP1Q9GZU7 261 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 SLC32A1Q9H598 525 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TMEM9BQ9NQ34 198 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 TLR8Q9NR97 1041 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 DDX19AQ9NUU7 478 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 C2orf42Q9NWW7 574 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 OCIAD1Q9NX40 245 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 LARSQ9P2J5 1176 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 MTRRQ9UBK8 725 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 FBXW11Q9UKB1 542 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 ICAM5Q9UMF0 924 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 GDAQ9Y2T3 454 aa4.25□□□□□ -1.73
GTF3C3-207ENST00000451088 USP9YO00507 2555 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 COL12A1Q99715 3063 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 A0A087WV48 116 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 A0A0U1RQJ8 604 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 A0A1B0GVM2 712 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 PLSCR5A0PG75 271 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 BCLAF3A2AJT9 711 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 KDM4EB2RXH2 506 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 PRRG1O14668 218 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 PTGESO14684 152 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 CAPN9O14815 690 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 CLDN3O15551 220 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 TOM1L1O75674 476 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 ZNF432O94892 652 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 FGF19O95750 216 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 SERPINC1P01008 464 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 IGKV3-20P01619 116 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 DAOP14920 347 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 MARCKSP29966 332 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 OR1D2P34982 312 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 MATR3P43243 847 aaKnown RBP eCLIP4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 CENPAP49450 140 aa4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 AARSP49588 968 aaKnown RBP eCLIP4.24□□□□□ -1.73
GTF3C3-207ENST00000451088 PEX3P56589 373 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms