RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 RBM4Q9BWF3 364 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 ERVK-6Q9BXR3 956 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 CLPBQ9H078 707 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 ABHD16BQ9H3Z7 469 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 NSUN3Q9H649 340 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 SYTL2Q9HCH5 934 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 IL1RAPQ9NPH3 570 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 FKBPLQ9UIM3 349 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 MAGEL2Q9UJ55 1249 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 PCDHB9Q9Y5E1 797 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 SPTBP11277 2137 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 C2orf81A6NN90 581 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 IFRD1O00458 451 aaPredicted RBP8.65□□□□□ -1.03
RTN4-206ENST00000394611 NCAM2O15394 837 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 STSP08842 583 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 ZNF865P0CJ78 1059 aaPredicted RBP8.65□□□□□ -1.03
RTN4-206ENST00000394611 PFKLP17858 780 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 TNNI3P19429 210 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 IMPDH1P20839 514 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 CCND3P30281 292 aaPredicted RBP8.65□□□□□ -1.03
RTN4-206ENST00000394611 MC4RP32245 332 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 TGM4P49221 684 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 TRAP1Q12931 704 aaKnown RBP8.65□□□□□ -1.03
RTN4-206ENST00000394611 ARHGEF6Q15052 776 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.03
RTN4-206ENST00000394611 PHKG1Q16816 387 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 FAM91A1Q658Y4 838 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 NLGN4XQ8N0W4 816 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 OTUB1Q96FW1 271 aaPredicted RBP8.65□□□□□ -1.03
RTN4-206ENST00000394611 ACAT2Q9BWD1 397 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 BCO2Q9BYV7 579 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 AGPAT4Q9NRZ5 378 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 GPR83Q9NYM4 423 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 STMN3Q9NZ72 180 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 OPTCQ9UBM4 332 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 EVPLQ92817 2033 aa8.65□□□□□ -1.03
RTN4-206ENST00000394611 FAM240BA0A1B0GVZ2 78 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 FAM47E-STBD1D6RA91 191 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 H3BSH0 61 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 NPHS1O60500 1241 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 MTX2O75431 263 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 IGHA2P01877 340 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 C9P02748 559 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 PRKAR2AP13861 404 aaKnown RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 EPHA2P29317 976 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 LILRA4P59901 499 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 RAB8AP61006 207 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ATP6V0D1P61421 351 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 CLCA4Q14CN2 919 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ADPRMQ3LIE5 342 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 TSTD2Q5T7W7 516 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ZNF549Q6P9A3 640 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 PLET1Q6UQ28 207 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ZNF517Q6ZMY9 492 aaPredicted RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 EIF3MQ7L2H7 374 aaKnown RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 TTC39CQ8N584 583 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 PMEPA1Q969W9 287 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 DHRS1Q96LJ7 313 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 MYRFLQ96LU7 910 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 CHIAQ9BZP6 476 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 THG1LQ9NWX6 298 aaKnown RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 RAB23Q9ULC3 237 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 LYVE1Q9Y5Y7 322 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 A0A1W2PP18 115 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 GNRH1P01148 92 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 CHRNA1P02708 482 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 SMPD1P17405 629 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 CD40LGP29965 261 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 AXLP30530 894 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 UQCRC1P31930 480 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ACVRL1P37023 503 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 SOX4Q06945 474 aaPredicted RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 IRF5Q13568 498 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 SNX17Q15036 470 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 STEAP3Q658P3 488 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ADCK2Q7Z695 626 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 CYP4Z1Q86W10 505 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 CHPT1Q8WUD6 406 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 SLC13A3Q8WWT9 602 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 SMG7Q92540 1137 aaKnown RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 MAL2Q969L2 176 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ROPN1LQ96C74 230 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 CD320Q9NPF0 282 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 VAPAQ9P0L0 249 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ANKRD34BA5PLL1 514 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 CYP11A1P05108 521 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 HIST1H2AGP0C0S8 130 aaPredicted RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 HAPLN1P10915 354 aaPredicted RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 BMP2P12643 396 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 HIST1H2ADP20671 130 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 CDH5P33151 784 aaPredicted RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 PRKAG1P54619 331 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 RPL6Q02878 288 aaKnown RBP8.64□□□□□ -1.03
RTN4-206ENST00000394611 OR4F3Q6IEY1 312 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ANKFN1Q8N957 763 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ATAD1Q8NBU5 361 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 OR13J1Q8NGT2 312 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ARMC5Q96C12 935 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 MSANTD3Q96H12 275 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 HIST1H2AHQ96KK5 128 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms