RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 HM13Q8TCT9 377 aa14.33□□□□□ -0.11
CXCL12-201ENST00000343575 CCDC126Q96EE4 140 aa14.33□□□□□ -0.11
CXCL12-201ENST00000343575 PDXPQ96GD0 296 aa14.33□□□□□ -0.11
CXCL12-201ENST00000343575 ERVK-6Q9BXR3 956 aa14.33□□□□□ -0.11
CXCL12-201ENST00000343575 RDH14Q9HBH5 336 aa14.33□□□□□ -0.11
CXCL12-201ENST00000343575 TNFRSF12AQ9NP84 129 aa14.33□□□□□ -0.11
CXCL12-201ENST00000343575 DMTF1Q9Y222 760 aa14.33□□□□□ -0.11
CXCL12-201ENST00000343575 ZFC3H1O60293 1989 aaKnown RBP14.33□□□□□ -0.12
CXCL12-201ENST00000343575 PRSS38A1L453 326 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 PPP6CO00743 305 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 SCAMP1O15126 338 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 KMOO15229 486 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 MAP3K13O43283 966 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 PSIP1O75475 530 aaKnown RBP14.33□□□□□ -0.12
CXCL12-201ENST00000343575 GSTM1P09488 218 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 GFAPP14136 432 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 HOXA6P31267 233 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 GSTM4Q03013 218 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 MAP7Q14244 749 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 SYTL3Q4VX76 610 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.33□□□□□ -0.12
CXCL12-201ENST00000343575 METRNLQ641Q3 311 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 IZUMO2Q6UXV1 221 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 Q6ZSR6 202 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 UBE2R2Q712K3 238 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-201ENST00000343575 CHST15Q7LFX5 561 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-201ENST00000343575 MAML2Q8IZL2 1156 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-201ENST00000343575 FBXO39Q8N4B4 442 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 CCNYL1Q8N7R7 359 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 PDPRQ8NCN5 879 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 OR56A4Q8NGH8 313 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 NSUN5Q96P11 429 aaKnown RBP14.33□□□□□ -0.12
CXCL12-201ENST00000343575 C1QTNF3Q9BXJ4 246 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 STN1Q9H668 368 aaKnown RBP14.33□□□□□ -0.12
CXCL12-201ENST00000343575 RMI1Q9H9A7 625 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 CD274Q9NZQ7 290 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 PTBP2Q9UKA9 531 aaKnown RBP14.33□□□□□ -0.12
CXCL12-201ENST00000343575 DNAJC16Q9Y2G8 782 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 TTC28Q96AY4 2481 aa14.33□□□□□ -0.12
CXCL12-201ENST00000343575 ARHGEF33A8MVX0 844 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 TMEM114B3SHH9 223 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 H3BM21 787 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 STX16-NPEPL1H3BU86 382 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 UBFD1O14562 309 aaKnown RBP14.32□□□□□ -0.12
CXCL12-201ENST00000343575 STX16O14662 325 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 H2AFYO75367 372 aaKnown RBP14.32□□□□□ -0.12
CXCL12-201ENST00000343575 GUCA1CO95843 209 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 C8GP07360 202 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 RPS17P08708 135 aaKnown RBP14.32□□□□□ -0.12
CXCL12-201ENST00000343575 PABPC4LP0CB38 370 aaKnown RBP14.32□□□□□ -0.12
CXCL12-201ENST00000343575 ALDH18A1P54886 795 aaKnown RBP14.32□□□□□ -0.12
CXCL12-201ENST00000343575 YPEL5P62699 121 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 DMPKQ09013 629 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 ASPHQ12797 758 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 CNPY1Q3B7I2 92 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 CCSMST1Q4G0I0 132 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 ENPP7Q6UWV6 458 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 FRMD7Q6ZUT3 714 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 CADM4Q8NFZ8 388 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 SKA2Q8WVK7 121 aaPredicted RBP14.32□□□□□ -0.12
CXCL12-201ENST00000343575 JADE3Q92613 823 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 RHBDF1Q96CC6 855 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 UHRF1Q96T88 793 aaPredicted RBP14.32□□□□□ -0.12
CXCL12-201ENST00000343575 DPEP2Q9H4A9 486 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 PARVBQ9HBI1 364 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 ZBTB26Q9HCK0 441 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 PRMT8Q9NR22 394 aaPredicted RBP14.32□□□□□ -0.12
CXCL12-201ENST00000343575 NUDT4Q9NZJ9 180 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 LRP4O75096 1905 aa14.32□□□□□ -0.12
CXCL12-201ENST00000343575 A0A1B0GTL3 188 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 NPHS1O60500 1241 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 ACP5P13686 325 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 TSPAN8P19075 237 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 MAOBP27338 520 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 EEF1DP29692 281 aaKnown RBP14.31□□□□□ -0.12
CXCL12-201ENST00000343575 RPIAP49247 311 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 CDH13P55290 713 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 LSAMPQ13449 338 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.31□□□□□ -0.12
CXCL12-201ENST00000343575 ZNF781Q8N8C0 355 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 PHC3Q8NDX5 983 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 C1orf216Q8TAB5 229 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 TSACCQ96A04 125 aaPredicted RBP14.31□□□□□ -0.12
CXCL12-201ENST00000343575 CNDP1Q96KN2 507 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 WDR92Q96MX6 357 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 SLC6A18Q96N87 628 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 TMEM79Q9BSE2 394 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 SHCBP1LQ9BZQ2 653 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 ZDHHC5Q9C0B5 715 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 PCED1AQ9H1Q7 454 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 PNPOQ9NVS9 261 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 SPATA6Q9NWH7 488 aaPredicted RBP14.31□□□□□ -0.12
CXCL12-201ENST00000343575 WDR37Q9Y2I8 494 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 CEP192Q8TEP8 1941 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 SDK1Q7Z5N4 2213 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 ZNF195O14628 629 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 SLC16A5O15375 505 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 NDUFS2O75306 463 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 WNT1P04628 370 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 VCLP18206 1134 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms