RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PTPN14Q15678 1187 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 NAB2Q15742 525 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 HIST2H2ACQ16777 129 aaPredicted RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 DCAF4L1Q3SXM0 396 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZNF585BQ52M93 769 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ALFQ53S48 1182 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 XKR4Q5GH76 650 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 HERC4Q5GLZ8 1057 aaPredicted RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 EFHC1Q5JVL4 640 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 PLPP4Q5VZY2 271 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 RUSC1-AS1Q66K80 236 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 TXNDC8Q6A555 127 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 LRRC8EQ6NSJ5 796 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ANKRD54Q6NXT1 300 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 MMS22LQ6ZRQ5 1243 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 RBM23Q86U06 439 aaKnown RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 TMEM173Q86WV6 379 aaPredicted RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 DAW1Q8N136 415 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ADAMTS15Q8TE58 950 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 SNX21Q969T3 373 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 CPB2Q96IY4 423 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 TXNDC15Q96J42 360 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 IFT74Q96LB3 600 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 KLHL15Q96M94 604 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 NECTIN4Q96NY8 510 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 GAD1Q99259 594 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ADPGKQ9BRR6 497 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 TRIM6Q9C030 488 aaPredicted RBP3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 CCSER1Q9C0I3 900 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 PDZD7Q9H5P4 517 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 MARCH5Q9NX47 278 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 MIOSQ9NXC5 875 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 ODF2LQ9ULJ1 636 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 FAM96BQ9Y3D0 163 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 PAM16Q9Y3D7 125 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 FANCMQ8IYD8 2048 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 GREB1Q4ZG55 1949 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 MIA3Q5JRA6 1907 aa3.64□□□□□ -1.83
CKS1BP3-201ENST00000600888 TSC2P49815 1807 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 OBSL1O75147 1896 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 A0A087WWV3 80 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 IGLV5-52A0A0A0MRZ9 124 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 A0A1W2PQM1 296 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 C4orf47A7E2U8 309 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 PP2D1A8MPX8 630 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 E9PMD0 336 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 H0YCG3 227 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 TAF4O00268 1085 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 PTGESO14684 152 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 DCXO43602 365 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 NDUFB4O95168 129 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 PAPSS2O95340 614 aaPredicted RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 CH25HO95992 272 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 MT-CYBP00156 380 aaPredicted RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 PIGRP01833 764 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 TFP02787 698 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 EDN1P05305 212 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ADRB2P07550 413 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 MCF2P10911 925 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 IRF1P10914 325 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 FCGR1AP12314 374 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ETFAP13804 333 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 AGAP20933 346 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 SYT1P21579 422 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 CCKBRP32239 447 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 PIGAP37287 484 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 UBA7P41226 1012 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 MTHFRP42898 656 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 PDLIM4P50479 330 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZNF131P52739 623 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLC12A3P55017 1021 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 PEX3P56589 373 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 SEC61A1P61619 476 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 POU5F1Q01860 360 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ELAVL2Q12926 359 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 DMP1Q13316 513 aaPredicted RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 KEAP1Q14145 624 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 RNPS1Q15287 305 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 USP41Q3LFD5 358 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 TMEM31Q5JXX7 168 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 INTS11Q5TA45 600 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ATF7IP2Q5U623 682 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ACAD10Q6JQN1 1059 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 FUT10Q6P4F1 479 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 KLHL24Q6TFL4 600 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ALKAL1Q6UXT8 129 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 C15orf39Q6ZRI6 1047 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 H1FNTQ75WM6 255 aaPredicted RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 SHFQ7M4L6 423 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 NOXA1Q86UR1 476 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 DHX40Q8IX18 779 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZCCHC9Q8N567 271 aaKnown RBP3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 NFKBIDQ8NI38 313 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 TMED6Q8WW62 240 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ERGIC1Q969X5 290 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZUFSPQ96AP4 578 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 CALML4Q96GE6 196 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 LRFN5Q96NI6 719 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 KLHL5Q96PQ7 755 aa3.63□□□□□ -1.83
CKS1BP3-201ENST00000600888 BBS4Q96RK4 519 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms