RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 GRB7Q14451 532 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 ZIC1Q15915 447 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 ANKRD22Q5VYY1 191 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 SPESP1Q6UW49 350 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 CDHR3Q6ZTQ4 885 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 TRIM73Q86UV7 250 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 TMEM126BQ8IUX1 230 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 SLC22A15Q8IZD6 547 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 LMNTD1Q8N9Z9 388 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 OR8K5Q8NH50 307 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 TTC1Q99614 292 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 MENTQ9BUN1 341 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 FAM60AQ9NP50 221 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 LATS2Q9NRM7 1088 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 HOMER3Q9NSC5 361 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 BFARQ9NZS9 450 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 TDRKHQ9Y2W6 561 aaKnown RBP14.18□□□□□ -0.14
FANCA-220ENST00000566409 NEU2Q9Y3R4 380 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 JRKLQ9Y4A0 524 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 KCNMB2Q9Y691 235 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 PIPSLA2A3N6 862 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 TMEM150CB9EJG8 249 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 GOLGA8KD6RF30 607 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 GOLGA8TH3BQL2 631 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 J3QKU1 62 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 PRMT5O14744 637 aaPredicted RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 SUV39H1O43463 412 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 SLC28A2O43868 658 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 CPNE3O75131 537 aaKnown RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 CHRM5P08912 532 aaPredicted RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 UGT2B7P16662 529 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 PEBP1P30086 187 aaKnown RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 SHMT2P34897 504 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 RORAP35398 523 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 VPS41P49754 854 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 RPS18P62269 152 aaKnown RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 CDK16Q00536 496 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 PLOD1Q02809 727 aaPredicted RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 SYTL3Q4VX76 610 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 PLEKHS1Q5SXH7 462 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 CAND1Q86VP6 1230 aaKnown RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 MPP5Q8N3R9 675 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 COG1Q8WTW3 980 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 APOBEC4Q8WW27 367 aaKnown RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 TRIM56Q9BRZ2 755 aaKnown RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 ACTL8Q9H568 366 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 MRM3Q9HC36 420 aaKnown RBP14.17□□□□□ -0.14
FANCA-220ENST00000566409 POLG2Q9UHN1 485 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 TUBD1Q9UJT1 453 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 KCND3Q9UK17 655 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 PCDHB3Q9Y5E6 796 aa14.17□□□□□ -0.14
FANCA-220ENST00000566409 RELNP78509 3460 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 C21orf140B9A014 251 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 H3BMH7 237 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 TMEM63AO94886 807 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 SLCO2B1O94956 709 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 VAPBO95292 243 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 KRT14P02533 472 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 CAPN1P07384 714 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 CTSBP07858 339 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 GABRA4P48169 554 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 TTPAP49638 278 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 GPS1Q13098 491 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 CYP1B1Q16678 543 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 DNAJC21Q5F1R6 531 aaKnown RBP14.16□□□□□ -0.14
FANCA-220ENST00000566409 AARS2Q5JTZ9 985 aaKnown RBP14.16□□□□□ -0.14
FANCA-220ENST00000566409 CTSL3PQ5NE16 218 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 FAM69BQ5VUD6 431 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 PRICKLE2Q7Z3G6 844 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 FAM20CQ8IXL6 584 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 DSELQ8IZU8 1212 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 LINC01555Q8NAE3 123 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 ASZ1Q8WWH4 475 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 CPT1BQ92523 772 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 MAGOHBQ96A72 148 aaKnown RBP14.16□□□□□ -0.14
FANCA-220ENST00000566409 PBKQ96KB5 322 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 LRFN5Q96NI6 719 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 BIRC8Q96P09 236 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 FAM117AQ9C073 453 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 CHST8Q9H2A9 424 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 KCNF1Q9H3M0 494 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 GRPEL1Q9HAV7 217 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 OR6C2Q9NZP2 312 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 CIDEBQ9UHD4 219 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 ANAPC5Q9UJX4 755 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 SOX13Q9UN79 622 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 ANKRD12Q6UB98 2062 aa14.16□□□□□ -0.14
FANCA-220ENST00000566409 PCM1Q15154 2024 aa14.15□□□□□ -0.14
FANCA-220ENST00000566409 TNRC6AQ8NDV7 1962 aaKnown RBP14.15□□□□□ -0.14
FANCA-220ENST00000566409 PCSK5Q92824 1860 aa14.15□□□□□ -0.14
FANCA-220ENST00000566409 CDC14CA4D256 554 aa14.15□□□□□ -0.14
FANCA-220ENST00000566409 K7EM74 188 aa14.15□□□□□ -0.14
FANCA-220ENST00000566409 AP3B1O00203 1094 aa14.15□□□□□ -0.14
FANCA-220ENST00000566409 MEN1O00255 615 aa14.15□□□□□ -0.14
FANCA-220ENST00000566409 RECKO95980 971 aa14.15□□□□□ -0.14
FANCA-220ENST00000566409 RPS3P23396 243 aaKnown RBP eCLIP14.15□□□□□ -0.14
FANCA-220ENST00000566409 PTPN4P29074 926 aa14.15□□□□□ -0.14
FANCA-220ENST00000566409 PPARGP37231 505 aaPredicted RBP14.15□□□□□ -0.14
FANCA-220ENST00000566409 COILP38432 576 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms