RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZFP69Q49AA0 526 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 ZYG11AQ6WRX3 759 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 KCTD8Q6ZWB6 473 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 IMP4Q96G21 291 aaKnown RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 MRPL57Q9BQC6 102 aaKnown RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 NPLQ9BXD5 320 aaPredicted RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 SAC3D1A6NKF1 404 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 FADS2P1A8MWK0 482 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 ZNF701M0R085 212 aaPredicted RBP12.11□□□□□ -0.47
USP11-206ENST00000469080 TGM1P22735 817 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 SLC26A3P40879 764 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
USP11-206ENST00000469080 BLVRAP53004 296 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 BCL2L1Q07817 233 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 CPSF6Q16630 551 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP11-206ENST00000469080 IMPG1Q17R60 797 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 AP5B1Q2VPB7 878 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 ZNF600Q6ZNG1 722 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 PTERQ96BW5 349 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 MYOCQ99972 504 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 TBCDQ9BTW9 1192 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 NANOGQ9H9S0 305 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 SYTL2Q9HCH5 934 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 BRD7Q9NPI1 651 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 FANCFQ9NPI8 374 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 NSMCE4AQ9NXX6 385 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 OR2AG2A6NM03 316 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 VPS26AO75436 327 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 OR7A10O76100 309 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 NDST3O95803 873 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 C8AP07357 584 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 PKLRP30613 574 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 RRM2P31350 389 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 HSPA7P48741 367 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 C1QTNF8P60827 252 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 NR6A1Q15406 480 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
USP11-206ENST00000469080 CHCHD4Q8N4Q1 142 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 FNDC5Q8NAU1 212 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 OR10Q1Q8NGQ4 319 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 ZNF420Q8TAQ5 688 aaPredicted RBP12.11□□□□□ -0.47
USP11-206ENST00000469080 METTL6Q8TCB7 284 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 C1orf74Q96LT6 269 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 SLC30A3Q99726 388 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 BBS2Q9BXC9 721 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 PRKD2Q9BZL6 878 aa12.11□□□□□ -0.47
USP11-206ENST00000469080 PIP5K1BO14986 540 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 LRATO95237 230 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 YAP1P46937 504 aaKnown RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 PGM2L1Q6PCE3 622 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 TSPAN33Q86UF1 283 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 FAM126BQ8IXS8 530 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 TTLQ8NG68 377 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 ZNF461Q8TAF7 563 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 PBXIP1Q96AQ6 731 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 TTYH2Q9BSA4 534 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 MCMBPQ9BTE3 642 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 WDR12Q9GZL7 423 aaKnown RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 EFCAB1Q9HAE3 211 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 WWOXQ9NZC7 414 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 COPG1Q9Y678 874 aaKnown RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 KPNA3O00505 521 aaPredicted RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 MRASO14807 208 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 OR4F21O95013 312 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 RBP1P09455 135 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 NCK1P16333 377 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 LPOP22079 712 aaPredicted RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 CASP3P42574 277 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 MAGEA6P43360 314 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 IL10RBQ08334 325 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 ADGRF1Q5T601 910 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 IL27RAQ6UWB1 636 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 CDH24Q86UP0 819 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 FBXL6Q8N531 539 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 ZNF784Q8NCA9 323 aaPredicted RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP11-206ENST00000469080 DACH2Q96NX9 599 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 ADGRE3Q9BY15 652 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 EML4Q9HC35 981 aaKnown RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 TIGARQ9NQ88 270 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 RIMS3Q9UJD0 308 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 MYO10Q9HD67 2058 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 SNNO75324 88 aaPredicted RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 PRAMEF1O95521 474 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 GSRP00390 522 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 C8BP07358 591 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 TTKP33981 857 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 CTNNB1P35222 781 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 SLC7A2P52569 658 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 OR4D1Q15615 310 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 TMEM207Q6UWW9 146 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 Q6ZVU0 165 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 MDGA1Q8NFP4 955 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 PGAP3Q96FM1 320 aaPredicted RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 SERPINI1Q99574 410 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 ATG10Q9H0Y0 220 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 LINC00597Q9H2U6 94 aa12.1□□□□□ -0.47
USP11-206ENST00000469080 FAM124BQ9H5Z6 455 aaPredicted RBP12.1□□□□□ -0.47
USP11-206ENST00000469080 ZNF334Q9HCZ1 680 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms