RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 CXCL9Q07325 125 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 ITGA7Q13683 1181 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 FIGNQ5HY92 759 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 BRMS1LQ5PSV4 323 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 GPALPP1Q8IXQ4 340 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 SMARCD2Q92925 531 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 SLC7A6OSQ96CW6 309 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 SPATA13Q96N96 652 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 ERCC1P07992 297 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 KCTD9Q7L273 389 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 KANSL1Q7Z3B3 1105 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 PNLDC1Q8NA58 520 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 SERINC1Q9NRX5 453 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 USP32Q8NFA0 1604 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 PREX1Q8TCU6 1659 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 PPEF2O14830 753 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 CABYRO75952 493 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 UBXN11Q5T124 520 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 NIPA1Q7RTP0 329 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 BORCS5Q969J3 196 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 MYO19Q96H55 970 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 ZSWIM3Q96MP5 696 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 CDK14O94921 469 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 HCKP08631 526 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 PPIGQ13427 754 aaKnown RBP eCLIP16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 TBRG1Q3YBR2 411 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 CAPN13Q6MZZ7 669 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 ALYREFQ86V81 257 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 OR8S1Q8NH09 359 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 ETNPPLQ8TBG4 499 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 PPP3R2Q96LZ3 170 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 TEFMQ96QE5 360 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 CDK16Q00536 496 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 TMED4Q7Z7H5 227 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 GPC2Q8N158 579 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 OR4L1Q8NH43 312 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 MR1Q95460 341 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 TTPALQ9BTX7 342 aa16.1■□□□□ 0.17
CACNA1A-258ENST00000638029 TRIM64CA6NLI5 447 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 PTPRAP18433 802 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 ST3GAL1Q11201 340 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 NET1Q7Z628 596 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 EZH1Q92800 747 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 CERS2Q96G23 380 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 LGR4Q9BXB1 951 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 FN3KQ9H479 309 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 HOXB8P17481 243 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 GCNT1Q02742 428 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 GPR180Q86V85 440 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 GATAD2BQ8WXI9 593 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 CHCHD6Q9BRQ6 235 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 GPATCH1Q9BRR8 931 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 CLK4Q9HAZ1 481 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 REV1Q9UBZ9 1251 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 SHOXO15266 292 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 C6orf52Q5T4I8 152 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 PAPSS1O43252 624 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 RENP00797 406 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 C1QTNF8P60827 252 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 RAB4BP61018 213 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 TMPPEQ6ZT21 453 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 KATNAL2Q8IYT4 538 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 DLG3Q92796 817 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 OR51B6Q9H340 312 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 CA14Q9ULX7 337 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 ACTL7BQ9Y614 415 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 KIAA1210Q9ULL0 1709 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 A0A0U1RQK1 487 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 C9JVG2 144 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 MAGEA3P43357 314 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 DLG2Q15700 870 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 FAM76BQ5HYJ3 339 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 RAB12Q6IQ22 244 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 TUBA3EQ6PEY2 450 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 TRPV4Q9HBA0 871 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 ZNF510Q9Y2H8 683 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 TM7SF2O76062 418 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 EPHA3P29320 983 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 ACSL1P33121 698 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 OR12D2P58182 307 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 PRR11Q96HE9 360 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 HBEGFQ99075 208 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 PORCNQ9H237 461 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 XKR8Q9H6D3 395 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 B3GAT2Q9NPZ5 323 aa16.09■□□□□ 0.17
CACNA1A-258ENST00000638029 SCDO00767 359 aa16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 TYRP1P17643 537 aa16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 RFX5P48382 616 aaPredicted RBP16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 TLE2Q04725 743 aa16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 GPR68Q15743 365 aa16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 RBFAQ8N0V3 343 aa16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 NOL11Q9H8H0 719 aaKnown RBP16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 BAZ2AQ9UIF9 1905 aaKnown RBP16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 CXCR1P25024 350 aa16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 NAA20P61599 178 aa16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 ANXA8L1Q5VT79 327 aa16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 LDB1Q86U70 411 aaPredicted RBP16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 THEM6Q8WUY1 208 aa16.08■□□□□ 0.17
CACNA1A-258ENST00000638029 JPH3Q8WXH2 748 aaPredicted RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms