RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 RBFAQ8N0V3 343 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 DTWD1Q8N5C7 304 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 FRS2Q8WU20 508 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 MYOCQ99972 504 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 MAF1Q9H063 256 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 EVLQ9UI08 416 aaPredicted RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 VPS4AQ9UN37 437 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 GIT1Q9Y2X7 761 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PCDHGA8Q9Y5G5 932 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 TNRC6CQ9HCJ0 1690 aaKnown RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 NUP205Q92621 2012 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 A8MU76 341 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 CHRNA1P02708 482 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 MT-ND2P03891 347 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 FUCA1P04066 466 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PRDX3P30048 256 aaKnown RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 GPC1P35052 558 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 DGKEP52429 567 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PHC1P78364 1004 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 OLR1P78380 273 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 SEMG2Q02383 582 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 SCAPQ12770 1279 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 KRT33BQ14525 404 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 OR2T5Q6IEZ7 315 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 FAM131AQ6UXB0 335 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 CLDN19Q8N6F1 224 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 OR2T29Q8NH02 315 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 GTPBP3Q969Y2 492 aaKnown RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 PYCR2Q96C36 320 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 LGALS12Q96DT0 336 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 KCNC2Q96PR1 638 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 IL12RB2Q99665 862 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 POLR3BQ9NW08 1133 aaPredicted RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 STMN3Q9NZ72 180 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 HSFX1Q9UBD0 423 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 TRPC4Q9UBN4 977 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 RAB23Q9ULC3 237 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PIPSLA2A3N6 862 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PRAMEF1O95521 474 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 RPLP0P05388 317 aaKnown RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 OR56A5P0C7T3 313 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 KCNE1P15382 129 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 CD247P20963 164 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 TACR2P21452 398 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 CDH12P55289 794 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 OR2B6P58173 313 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 ZNF33AQ06730 810 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 HIST2H2ACQ16777 129 aaPredicted RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 XKR6Q5GH73 641 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 HIST2H2AA3Q6FI13 130 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 FAM117BQ6P1L5 589 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 ARMCX6Q7L4S7 300 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 ANKRD13BQ86YJ7 626 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 GPR65Q8IYL9 337 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 SPARTQ8N0X7 666 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 FAM110BQ8TC76 370 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 ZFP90Q8TF47 636 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 C1QTNF1Q9BXJ1 281 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PRRG3Q9BZD7 231 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 CRISPLD1Q9H336 500 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 PAK1IP1Q9NWT1 392 aaPredicted RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 MOSPD1Q9UJG1 213 aa10.34□□□□□ -0.75
USB1-212ENST00000566082 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.34□□□□□ -0.75
USB1-212ENST00000566082 INSIG1O15503 277 aa10.33□□□□□ -0.75
USB1-212ENST00000566082 MITFO75030 526 aaPredicted RBP10.33□□□□□ -0.75
USB1-212ENST00000566082 CLDN9O95484 217 aa10.33□□□□□ -0.75
USB1-212ENST00000566082 OXSR1O95747 527 aaPredicted RBP10.33□□□□□ -0.75
USB1-212ENST00000566082 MYL12AP19105 171 aa10.33□□□□□ -0.75
USB1-212ENST00000566082 GSTM2P28161 218 aa10.33□□□□□ -0.75
USB1-212ENST00000566082 USP39Q53GS9 565 aaKnown RBP10.33□□□□□ -0.75
USB1-212ENST00000566082 C17orf50Q8WW18 174 aa10.33□□□□□ -0.75
USB1-212ENST00000566082 MRM3Q9HC36 420 aaKnown RBP10.33□□□□□ -0.75
USB1-212ENST00000566082 PEX16Q9Y5Y5 336 aa10.33□□□□□ -0.75
USB1-212ENST00000566082 COL2A1P02458 1487 aaPredicted RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 MEIS3P2A8K0S8 358 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 HNRNPCL2B2RXH8 293 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 OR1I1O60431 355 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 SNX4O95219 450 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 TRBC1P01850 177 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 C1QAP02745 245 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 ESR1P03372 595 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 RPIAP49247 311 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 HTR6P50406 440 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 QPRTQ15274 297 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 UBE2R2Q712K3 238 aaPredicted RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 FUNDC1Q8IVP5 155 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 ALDH16A1Q8IZ83 802 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 GLB1L3Q8NCI6 653 aaPredicted RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 OTUB1Q96FW1 271 aaPredicted RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 IMP4Q96G21 291 aaKnown RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 SH3YL1Q96HL8 342 aaPredicted RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 C16orf70Q9BSU1 422 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 DERL2Q9GZP9 239 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 AASDHPPTQ9NRN7 309 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 MAP10Q9P2G4 905 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 EEDO75530 441 aaKnown RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 GABBR2O75899 941 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 SHMT2P34897 504 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 RPS3AP61247 264 aaKnown RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 RPS24P62847 133 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms