RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 RIOK2Q9BVS4 552 aaKnown RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 TMEM30AQ9NV96 361 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 DNAJC11Q9NVH1 559 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 OAZ3Q9UMX2 235 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 LRRC14BA6NHZ5 514 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 ERAL1O75616 437 aaKnown RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 DNTTP04053 509 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 RPN2P04844 631 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 EPORP19235 508 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 LBX1P52954 281 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 LMAN2Q12907 356 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 EPS8Q12929 822 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 GDPD4Q6W3E5 623 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 RTN4RL1Q86UN2 441 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 TRIM69Q86WT6 500 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 C2CD4AQ8NCU7 369 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 HM13Q8TCT9 377 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 PROX1Q92786 737 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 PHF21AQ96BD5 680 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 OTUB1Q96FW1 271 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 MTERF1Q99551 399 aaKnown RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 EBPLQ9BY08 206 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 OR2AG1Q9H205 316 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 SGK2Q9HBY8 427 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 RAD18Q9NS91 495 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 OSER1Q9NX31 292 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 WDR37Q9Y2I8 494 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 GMPPBQ9Y5P6 360 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 ZCWPW2A0A1B0GU75 182 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 CENPXA8MT69 81 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 HNRNPCL2B2RXH8 293 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 SLC28A1O00337 649 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 FGF19O95750 216 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 SLC35E2BP0CK96 405 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 ZNF182P17025 639 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 IMPDH1P20839 514 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 SLC7A1P30825 629 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 HERVK_113P63132 956 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 ALDH6A1Q02252 535 aaKnown RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 TP53BP2Q13625 1128 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 SIM2Q14190 667 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 APCDD1Q8J025 514 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 TRIM63Q969Q1 353 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 CASD1Q96PB1 797 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 FERD3LQ96RJ6 166 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 SMAD5Q99717 465 aaKnown RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 HOPXQ9BPY8 73 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 ERVK-6Q9BXR3 956 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 MKS1Q9NXB0 559 aa11.11□□□□□ -0.63
SMPD4-218ENST00000482171 COPG1Q9Y678 874 aaKnown RBP11.11□□□□□ -0.63
SMPD4-218ENST00000482171 QSOX1O00391 747 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 TNFRSF21O75509 655 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 GJB3O75712 270 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 CCNKO75909 580 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 APODP05090 189 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 RHOP08100 348 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 GSTM1P09488 218 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 GCAP28676 217 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 IL12RB1P42701 662 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 AGTR2P50052 363 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 POLR2JP52435 117 aaKnown RBP11.1□□□□□ -0.63
SMPD4-218ENST00000482171 GLYATQ6IB77 296 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 ZCCHC8Q6NZY4 707 aaKnown RBP11.1□□□□□ -0.63
SMPD4-218ENST00000482171 THAP5Q7Z6K1 395 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 ADGRG6Q86SQ4 1221 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 FNDC8Q8TC99 324 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 PGAP3Q96FM1 320 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-218ENST00000482171 WNK3Q9BYP7 1800 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 NSUN3Q9H649 340 aaKnown RBP11.1□□□□□ -0.63
SMPD4-218ENST00000482171 CSNK1G1Q9HCP0 422 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 NUDT4Q9NZJ9 180 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 B4GALT6Q9UBX8 382 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 CNOT6Q9ULM6 557 aaKnown RBP11.1□□□□□ -0.63
SMPD4-218ENST00000482171 TGM5O43548 720 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 CYP7B1O75881 506 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 HOXD8P13378 290 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-218ENST00000482171 HPCAL1P37235 193 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 CEP78Q5JTW2 689 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 C22orf39Q6P5X5 142 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 DPY19L3Q6ZPD9 716 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 PHYKPLQ8IUZ5 450 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 ARHGAP12Q8IWW6 846 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 CENPSQ8N2Z9 138 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 OR10G6Q8NH81 332 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 TIFAQ96CG3 184 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 REPS1Q96D71 796 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 ASB9Q96DX5 294 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 C1QTNF7Q9BXJ2 289 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 MIR1-1HGQ9H1L0 117 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 TFB2MQ9H5Q4 396 aaKnown RBP11.1□□□□□ -0.63
SMPD4-218ENST00000482171 GMEB1Q9Y692 573 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 GABBR2O75899 941 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 CLDN9O95484 217 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 UROSP10746 265 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 CTSEP14091 401 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 MAGEA8P43361 318 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 PSAPL1Q6NUJ1 521 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 RGL4Q8IZJ4 473 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 MARVELD2Q8N4S9 558 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms