RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 OTOP2Q7RTS6 562 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 TMEM135Q86UB9 458 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 PHYKPLQ8IUZ5 450 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 OLFM1Q99784 485 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 EXD2Q9NVH0 621 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 PTGDR2Q9Y5Y4 395 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 CLDN25C9JDP6 229 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 BHMG1C9JSJ3 638 aaPredicted RBP16.91■□□□□ 0.3
GABRB3-202ENST00000311550 STX11O75558 287 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 IZUMO1Q8IYV9 350 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 TOP1MTQ969P6 601 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 DUSP26Q9BV47 211 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 MRPL39Q9NYK5 338 aaKnown RBP16.91■□□□□ 0.3
GABRB3-202ENST00000311550 MAP10Q9P2G4 905 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 ZW10O43264 779 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 RSL1D1O76021 490 aaKnown RBP16.91■□□□□ 0.3
GABRB3-202ENST00000311550 CLDN7O95471 211 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 FGBP02675 491 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 SMG8Q8ND04 991 aaKnown RBP16.91■□□□□ 0.3
GABRB3-202ENST00000311550 RAB2BQ8WUD1 216 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 MRGPRX2Q96LB1 330 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 NSUN3Q9H649 340 aaKnown RBP16.91■□□□□ 0.3
GABRB3-202ENST00000311550 ABCB9Q9NP78 766 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 GSAPA4D1B5 854 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 TPST2O60704 377 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 FAM131AQ6UXB0 335 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 KIAA1324Q6UXG2 1013 aaKnown RBP16.91■□□□□ 0.3
GABRB3-202ENST00000311550 GOLGA7Q7Z5G4 137 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 FAM124AQ86V42 546 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 KBTBD7Q8WVZ9 684 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 KIAA1191Q96A73 305 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 BIRC7Q96CA5 298 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 PTPN18Q99952 460 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 ADAMTS10Q9H324 1103 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 C11orf16Q9NQ32 467 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 ZIM2Q9NZV7 527 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 FADS2P1A8MWK0 482 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 HAS3O00219 553 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 PER2O15055 1255 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 ADAMDEC1O15204 470 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 FAM189A1O60320 539 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 CHRM5P08912 532 aaPredicted RBP16.91■□□□□ 0.3
GABRB3-202ENST00000311550 ZNF33AQ06730 810 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 QPRTQ15274 297 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 OR4F3Q6IEY1 312 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 GULP1Q9UBP9 304 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 N6AMT1Q9Y5N5 214 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 ZNF780BQ9Y6R6 833 aa16.91■□□□□ 0.3
GABRB3-202ENST00000311550 ADH1CP00326 375 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 ALOX5P09917 674 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 AZGP1P25311 298 aaKnown RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 MAPK12P53778 367 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 COPZ1P61923 177 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 CEACAM7Q14002 265 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 DNAJB7Q7Z6W7 309 aaPredicted RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 COLGALT2Q8IYK4 626 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 DPF3Q92784 378 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 HEPHQ9BQS7 1158 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 CCDC177Q9NQR7 707 aaPredicted RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 HOXA11P31270 313 aaPredicted RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 SNAPC1Q16533 368 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 TXNDC8Q6A555 127 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 TMEM248Q9NWD8 314 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 RUVBL1Q9Y265 456 aaKnown RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 ZNF99A8MXY4 864 aaPredicted RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 DNAJB13P59910 316 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 SRSF11Q05519 484 aaKnown RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 HKDC1Q2TB90 917 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 STEAP4Q687X5 459 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 ERI1Q8IV48 349 aaKnown RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 SLC43A3Q8NBI5 491 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 PDPRQ8NCN5 879 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 RAD51AP1Q96B01 352 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 DERL2Q9GZP9 239 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 ALS2Q96Q42 1657 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 LCHNA4D1U4 455 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 LRRC14BA6NHZ5 514 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 LOC730098B7Z3J9 87 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 CASKO14936 926 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 FKTNO75072 461 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 PGLSO95336 258 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 IFNA16P05015 189 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 GJA1P17302 382 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 SF1Q15637 639 aaKnown RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 ZBED5Q49AG3 693 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 C2orf15Q8WU43 125 aaKnown RBP16.9■□□□□ 0.3
GABRB3-202ENST00000311550 COPS4Q9BT78 406 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 FNIP2Q9P278 1114 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 DEC1Q9P2X7 70 aa16.9■□□□□ 0.3
GABRB3-202ENST00000311550 TRBV23OR9-2A0A075B6M9 112 aa16.89■□□□□ 0.3
GABRB3-202ENST00000311550 CARNS1A5YM72 827 aa16.89■□□□□ 0.3
GABRB3-202ENST00000311550 SCAMP1O15126 338 aa16.89■□□□□ 0.3
GABRB3-202ENST00000311550 OR10H2O60403 315 aa16.89■□□□□ 0.3
GABRB3-202ENST00000311550 SNNO75324 88 aaPredicted RBP16.89■□□□□ 0.3
GABRB3-202ENST00000311550 RPL4P36578 427 aaKnown RBP16.89■□□□□ 0.3
GABRB3-202ENST00000311550 TECRLQ5HYJ1 363 aa16.89■□□□□ 0.3
GABRB3-202ENST00000311550 FAM46CQ5VWP2 391 aa16.89■□□□□ 0.3
GABRB3-202ENST00000311550 AKAP14Q86UN6 197 aa16.89■□□□□ 0.3
GABRB3-202ENST00000311550 ANKRD49Q8WVL7 239 aa16.89■□□□□ 0.3
GABRB3-202ENST00000311550 RNASEH2AO75792 299 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms