RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 OR13J1Q8NGT2 312 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 FBXO17Q96EF6 278 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 REEP2Q9BRK0 252 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 MED10Q9BTT4 135 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 JAM3Q9BX67 310 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 FBXL2Q9UKC9 423 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 DUSP12Q9UNI6 340 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 RGS14O43566 566 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 IFNA10P01566 189 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 IFNA4P05014 189 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 CTPS1P17812 591 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 GRIA1P42261 906 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 EPHA5P54756 1037 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ARF3P61204 181 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ARF1P84077 181 aaKnown RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 TRIM28Q13263 835 aaKnown RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ATP6AP1Q15904 470 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 HIST2H2ACQ16777 129 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 GCNT7Q6ZNI0 430 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 PDZD9Q8IXQ8 264 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 HS6ST3Q8IZP7 471 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ANKLE1Q8NAG6 615 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ETNPPLQ8TBG4 499 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC16A10Q8TF71 515 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 NSMCE2Q96MF7 247 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 MED15Q96RN5 788 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 MROH8Q9H579 483 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 TLE6Q9H808 572 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 CHRAC1Q9NRG0 131 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 SEMA3GQ9NS98 782 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 VAPAQ9P0L0 249 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC6A14Q9UN76 642 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 G6PDP11413 515 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 ANXA7P20073 488 aaKnown RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 DCKP27707 260 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 SSTR4P31391 388 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 LEPRP48357 1165 aaKnown RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 AFF3P51826 1226 aaKnown RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 BCAT1P54687 386 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 GCNT1Q02742 428 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 TDGQ13569 410 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 CHRNA6Q15825 494 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 KCNA10Q16322 511 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 AP5B1Q2VPB7 878 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 NXPE2Q96DL1 559 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 MOCOSQ96EN8 888 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 PGAP3Q96FM1 320 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF578Q96N58 590 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 NKX6-2Q9C056 277 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 EML4Q9HC35 981 aaKnown RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 CCM2LQ9NUG4 571 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 C3orf18Q9UK00 162 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 KCNH4Q9UQ05 1017 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 HIF3AQ9Y2N7 669 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 WDR62O43379 1518 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 LAD1O00515 517 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 MPIP34949 423 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 ARHGAP11BQ3KRB8 267 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 BBS12Q6ZW61 710 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 ERO1BQ86YB8 467 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 TMEM199Q8N511 208 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 TMC2Q8TDI7 906 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 LINC00052Q96N35 136 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 RUSC1Q9BVN2 902 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 RBM7Q9Y580 266 aaKnown RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 PCDHA1Q9Y5I3 950 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 ARHGEF12Q9NZN5 1544 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 INMT-MINDY4F8WBC2 141 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 NRP1O14786 923 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 AKAP8O43823 692 aaKnown RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 GLRA3O75311 464 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 MED6O75586 246 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 HLA-DOAP06340 250 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 CPB1P15086 417 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 GLRA2P23416 452 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 MPSTP25325 297 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 LTKP29376 864 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 CDC34P49427 236 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 NRG1Q02297 640 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 DMP1Q13316 513 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 FAM83EQ2M2I3 478 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 SYVN1Q86TM6 617 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 SETD9Q8NE22 299 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 RP9Q8TA86 221 aaKnown RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 TCEAL4Q96EI5 215 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 PHF23Q9BUL5 403 aaPredicted RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 CHRDQ9H2X0 955 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 ANKEF1Q9NU02 776 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 SLCO3A1Q9UIG8 710 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 IGSF9BQ9UPX0 1349 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 KDM5BQ9UGL1 1544 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 WASHC1A8K0Z3 465 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 EEF2KO00418 725 aaKnown RBP8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 ADAM12O43184 909 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 TCF21O43680 179 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 TSPAN3O60637 253 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 RP2O75695 350 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 SPDEFO95238 335 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 ERBB2P04626 1255 aa8.86□□□□□ -0.99
GTF2A1-203ENST00000553612 MBL2P11226 248 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms