RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PKMP14618 531 aaKnown RBP17.74■□□□□ 0.43
VEGFA-222ENST00000520948 XRCC1P18887 633 aaPredicted RBP17.74■□□□□ 0.43
VEGFA-222ENST00000520948 TNFRSF8P28908 595 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 PBLDP30039 288 aaPredicted RBP17.74■□□□□ 0.43
VEGFA-222ENST00000520948 CCR7P32248 378 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 EIF3BP55884 814 aaKnown RBP17.74■□□□□ 0.43
VEGFA-222ENST00000520948 MPP1Q00013 466 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 SPIDRQ14159 915 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 CLCA4Q14CN2 919 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 KYNUQ16719 465 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 CAPRIN2Q6IMN6 1127 aaKnown RBP17.74■□□□□ 0.43
VEGFA-222ENST00000520948 CNSTQ6PJW8 725 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 GABPB2Q8TAK5 448 aaPredicted RBP17.74■□□□□ 0.43
VEGFA-222ENST00000520948 TTC9Q92623 222 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 NAT6Q93015 286 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 MCMBPQ9BTE3 642 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 OR52A5Q9H2C5 316 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 OSGEPL1Q9H4B0 414 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 COG4Q9H9E3 785 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 ZNF624Q9P2J8 865 aaPredicted RBP17.74■□□□□ 0.43
VEGFA-222ENST00000520948 GNPTGQ9UJJ9 305 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 MED16Q9Y2X0 877 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 PCDHGA8Q9Y5G5 932 aa17.74■□□□□ 0.43
VEGFA-222ENST00000520948 KIR2DS5A0A0G2JLQ3 304 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 A0A0G2JNG1 304 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 FAM159BA6NKW6 160 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 CDRT15L2A8MXV6 281 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 PYCARD-AS1I3L0S3 204 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 J3QKU1 62 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 KIR2DS3K7RE56 304 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 LIN7AO14910 233 aaPredicted RBP17.73■□□□□ 0.43
VEGFA-222ENST00000520948 PPM1DO15297 605 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 SNX2O60749 519 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 GPC4O75487 556 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 RPL10P27635 214 aaKnown RBP17.73■□□□□ 0.43
VEGFA-222ENST00000520948 AOAHP28039 575 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 FASLGP48023 281 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 MAZP56270 477 aaKnown RBP17.73■□□□□ 0.43
VEGFA-222ENST00000520948 RPA4Q13156 261 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 KIR2DS5Q14953 304 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.73■□□□□ 0.43
VEGFA-222ENST00000520948 PTRHD1Q6GMV3 140 aaKnown RBP17.73■□□□□ 0.43
VEGFA-222ENST00000520948 CAPN12Q6ZSI9 719 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 KRT222Q8N1A0 295 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 OR6C4Q8NGE1 309 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 WDR36Q8NI36 951 aaKnown RBP17.73■□□□□ 0.43
VEGFA-222ENST00000520948 SLC37A2Q8TED4 501 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 GRAMD1AQ96CP6 724 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 FUT8Q9BYC5 575 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 PPANQ9NQ55 473 aaKnown RBP17.73■□□□□ 0.43
VEGFA-222ENST00000520948 NINJ2Q9NZG7 142 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 SLC17A6Q9P2U8 582 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 CDYLQ9Y232 598 aa17.73■□□□□ 0.43
VEGFA-222ENST00000520948 TRBV23OR9-2A0A075B6M9 112 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 CXorf49A8MYA2 514 aaPredicted RBP17.72■□□□□ 0.43
VEGFA-222ENST00000520948 H3BMM5 538 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 NUDT21O43809 227 aaKnown RBP17.72■□□□□ 0.43
VEGFA-222ENST00000520948 SPAG6O75602 509 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 FAM153BP0C7A2 387 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 MYBL2P10244 700 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 SLC2A4P14672 509 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 PNLIPP16233 465 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 GLB1P16278 677 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 PDHA2P29803 388 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 SLC19A1P41440 591 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 UBE2IP63279 158 aaKnown RBP17.72■□□□□ 0.43
VEGFA-222ENST00000520948 TIAL1Q01085 375 aaKnown RBP eCLIP17.72■□□□□ 0.43
VEGFA-222ENST00000520948 CLN3Q13286 438 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 NR1D2Q14995 579 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 FAM153CQ494X1 144 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 UBAP2Q5T6F2 1119 aaKnown RBP17.72■□□□□ 0.43
VEGFA-222ENST00000520948 ZNF438Q7Z4V0 828 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 B3GNT8Q7Z7M8 397 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 SLC26A11Q86WA9 606 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 ELMO1Q92556 727 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 WBP1Q96G27 269 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 PANX3Q96QZ0 392 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 INSM2Q96T92 566 aaPredicted RBP17.72■□□□□ 0.43
VEGFA-222ENST00000520948 TSSK1BQ9BXA7 367 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 TXLNGYQ9BZA5 131 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 CDC42EP4Q9H3Q1 356 aaKnown RBP17.72■□□□□ 0.43
VEGFA-222ENST00000520948 SARS2Q9NP81 518 aaKnown RBP17.72■□□□□ 0.43
VEGFA-222ENST00000520948 GALPQ9UBC7 116 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 RABGEF1Q9UJ41 708 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 PSMD13Q9UNM6 376 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 PSAT1Q9Y617 370 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 COMMD10Q9Y6G5 202 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 RNF215Q9Y6U7 377 aa17.72■□□□□ 0.43
VEGFA-222ENST00000520948 CCDC187A0A096LP49 1063 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 PDZK1P1A8MUH7 402 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 K7ENP7 123 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 NIPSNAP2O75323 286 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 ITGB6P18564 788 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 CD151P48509 253 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 PLOD1Q02809 727 aaPredicted RBP17.71■□□□□ 0.43
VEGFA-222ENST00000520948 GBX1Q14549 363 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 SEPT7Q16181 437 aaKnown RBP17.71■□□□□ 0.43
VEGFA-222ENST00000520948 INO80CQ6PI98 192 aaPredicted RBP17.71■□□□□ 0.43
VEGFA-222ENST00000520948 NAPRTQ6XQN6 538 aa17.71■□□□□ 0.43
VEGFA-222ENST00000520948 CCDC81Q6ZN84 652 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms