RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.61□□□□□ -1.03
SMARCA1-203ENST00000371123 MCOLN3Q8TDD5 553 aa8.61□□□□□ -1.03
SMARCA1-203ENST00000371123 GIPC2Q8TF65 315 aa8.61□□□□□ -1.03
SMARCA1-203ENST00000371123 OTULINQ96BN8 352 aa8.61□□□□□ -1.03
SMARCA1-203ENST00000371123 TNIP3Q96KP6 325 aa8.61□□□□□ -1.03
SMARCA1-203ENST00000371123 IKZF5Q9H5V7 419 aa8.61□□□□□ -1.03
SMARCA1-203ENST00000371123 ACOT13Q9NPJ3 140 aa8.61□□□□□ -1.03
SMARCA1-203ENST00000371123 NUFIP1Q9UHK0 495 aaKnown RBP8.61□□□□□ -1.03
SMARCA1-203ENST00000371123 FAM95CA0A1B0GW59 222 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 CIB4A0PJX0 185 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 OR2A25A4D2G3 310 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 UPK3BL1B0FP48 263 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 UPK3BL2E5RIL1 263 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 MSCO60682 206 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 CYP2A6P11509 494 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 IL10P22301 178 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 DNAJB2P25686 324 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 RRM2P31350 389 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 KRT6CP48668 564 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 TAF6P49848 677 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 AFF1P51825 1210 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 TAS2R39P59534 338 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 LRRC74AQ0VAA2 488 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 DPYSL2Q16555 572 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 SYT16Q17RD7 645 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 SPANXN3Q5MJ09 141 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 C10orf120Q5SQS8 335 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 KIAA1324Q6UXG2 1013 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 P2RY8Q86VZ1 359 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 ERO1BQ86YB8 467 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 APH1BQ8WW43 257 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 DPF3Q92784 378 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 ULK4Q96C45 1275 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 ROPN1LQ96C74 230 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 ZFYVE19Q96K21 471 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 ZNF670Q9BS34 389 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 DUSP21Q9H596 190 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 AMBNQ9NP70 447 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 TIGARQ9NQ88 270 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 FKBP14Q9NWM8 211 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 UBA2Q9UBT2 640 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 KCTD3Q9Y597 815 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 CCL15-CCL14A0A0B4J2E2 113 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 ISPDA4D126 451 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 M0R3G1 203 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 H2AFYO75367 372 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 BEST1O76090 585 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 FADS2O95864 444 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 C1RP00736 705 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 PKLRP30613 574 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 BMP8BP34820 402 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 CD86P42081 329 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 TARDBPQ13148 414 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 NFYCQ13952 458 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 CCL15Q16663 113 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 DGUOKQ16854 277 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 TECRLQ5HYJ1 363 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 TMEM65Q6PI78 240 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 BMP8AQ7Z5Y6 402 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 KCTD20Q7Z5Y7 419 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 PIM3Q86V86 326 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 MCFD2Q8NI22 146 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 TTC9Q92623 222 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 REPS1Q96D71 796 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 CDK15Q96Q40 435 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 COQ7Q99807 217 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.6□□□□□ -1.032e-7■■■■■ 33
SMARCA1-203ENST00000371123 CASS4Q9NQ75 786 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 PCDHGB6Q9Y5F9 930 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 LRATO95237 230 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 LDLRP01130 860 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 GPIP06744 558 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 HSMCR30P0CW71 290 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 THPOP40225 353 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 NKX3-2P78367 333 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 TIAL1Q01085 375 aaKnown RBP eCLIP8.6□□□□□ -1.039e-7■■■□□ 16.2
SMARCA1-203ENST00000371123 LRRC73Q5JTD7 316 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 PAMR1Q6UXH9 720 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 METTL23Q86XA0 190 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 C8orf59Q8N0T1 100 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 TCAIMQ8N3R3 496 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 PPHLN1Q8NEY8 458 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 PIK3R3Q92569 461 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 MARC2Q969Z3 335 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 PPM1MQ96MI6 270 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 DEPDC7Q96QD5 511 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 NIFKQ9BYG3 293 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 EVA1BQ9NVM1 165 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 ANAPC2Q9UJX6 822 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 HCN4Q9Y3Q4 1203 aa8.6□□□□□ -1.03
SMARCA1-203ENST00000371123 SPAG17Q6Q759 2223 aa8.59□□□□□ -1.03
SMARCA1-203ENST00000371123 LOC100130705A0A1B0GUX0 176 aa8.59□□□□□ -1.03
SMARCA1-203ENST00000371123 B8ZZF3 427 aa8.59□□□□□ -1.03
SMARCA1-203ENST00000371123 CBX4O00257 560 aa8.59□□□□□ -1.03
SMARCA1-203ENST00000371123 CPNE3O75131 537 aaKnown RBP8.59□□□□□ -1.03
SMARCA1-203ENST00000371123 NTRK1P04629 796 aa8.59□□□□□ -1.03
SMARCA1-203ENST00000371123 CYBBP04839 570 aa8.59□□□□□ -1.03
SMARCA1-203ENST00000371123 M6PRP20645 277 aa8.59□□□□□ -1.03
SMARCA1-203ENST00000371123 GADD45AP24522 165 aa8.59□□□□□ -1.03
SMARCA1-203ENST00000371123 MLLT6P55198 1093 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms